RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 SF3B4Q15427 424 aaKnown RBP eCLIP7.82□□□□□ -1.16
MCPH1-201ENST00000344683 TP53I3Q53FA7 332 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 SLX4IPQ5VYV7 408 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 TRNP1Q6NT89 227 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 SUSD1Q6UWL2 747 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 HMGB4Q8WW32 186 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 TVP23CQ96ET8 276 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 TMEM19Q96HH6 336 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 TPPP3Q9BW30 176 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 SLC25A18Q9H1K4 315 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 RIMS3Q9UJD0 308 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 MEGF6O75095 1541 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 BLACEA4D250 179 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 ALDOAP04075 364 aaKnown RBP7.82□□□□□ -1.16
MCPH1-201ENST00000344683 NAGAP17050 411 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 GDNFP39905 211 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 ETV4P43268 484 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 EMP2P54851 167 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 ACOT7LQ6ZUV0 252 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 FCRLAQ7L513 359 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 PGBD5Q8N414 524 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 NKAIN3Q8N8D7 197 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 OR13C9Q8NGT0 318 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 IFI44Q8TCB0 444 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 DUSP19Q8WTR2 217 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 ZNF689Q96CS4 500 aaPredicted RBP7.82□□□□□ -1.16
MCPH1-201ENST00000344683 IMP4Q96G21 291 aaKnown RBP7.82□□□□□ -1.16
MCPH1-201ENST00000344683 SGPP1Q9BX95 441 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 SUCNR1Q9BXA5 334 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 RAB18Q9NP72 206 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 NECAP2Q9NVZ3 263 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 CAMK2AQ9UQM7 478 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 SPATA31A1Q5TZJ5 1347 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 ARFGEF2Q9Y6D5 1785 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 B4GAT1O43505 415 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 SFTPDP35247 375 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 HOXD13P35453 343 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 AMTP48728 403 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 CASP6P55212 293 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 RPL7L1Q6DKI1 246 aaKnown RBP7.82□□□□□ -1.16
MCPH1-201ENST00000344683 ADGRG3Q86Y34 549 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 APH1AQ96BI3 265 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 C20orf24Q9BUV8 137 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 USP36Q9P275 1121 aaKnown RBP7.82□□□□□ -1.16
MCPH1-201ENST00000344683 FAM221BA6H8Z2 402 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 NME4O00746 187 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 OR5H8P0DN80 308 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 DPP4P27487 766 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 CSN1S1P47710 185 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 SLC35A2P78381 396 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 RGNQ15493 299 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 LRRC73Q5JTD7 316 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 EOGTQ5NDL2 527 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 ZNF322Q6U7Q0 402 aaPredicted RBP7.82□□□□□ -1.16
MCPH1-201ENST00000344683 CLEC20AQ6ZU45 233 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 OR2T27Q8NH04 317 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 NTPCRQ9BSD7 190 aaKnown RBP7.82□□□□□ -1.16
MCPH1-201ENST00000344683 STRADBQ9C0K7 418 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 FKRPQ9H9S5 495 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 ATP13A2Q9NQ11 1180 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 SLC2A4RGQ9NR83 387 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 MTCH1Q9NZJ7 389 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 PLAGL1Q9UM63 463 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 A3GALT2U3KPV4 340 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 OR5K4A6NMS3 321 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 ZNF724A8MTY0 619 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 H3BQ06 376 aaPredicted RBP7.82□□□□□ -1.16
MCPH1-201ENST00000344683 TSPAN6O43657 245 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 OMGP23515 440 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 GGT5P36269 586 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 PREPP48147 710 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 TBPL1P62380 186 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 HYAL2Q12891 473 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 CPNE8Q86YQ8 564 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 OR9K2Q8NGE7 335 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 DNAJB11Q9UBS4 358 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 ACTL7AQ9Y615 435 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 ANKRD31Q8N7Z5 1873 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 FGF4P08620 206 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 NTF3P20783 257 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 UBE2G1P62253 170 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 CRMP1Q14194 572 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 MPPED2Q15777 294 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 ACOT6Q3I5F7 207 aaPredicted RBP7.82□□□□□ -1.16
MCPH1-201ENST00000344683 Q3ZCU0 254 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 CATSPEREQ5SY80 951 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 PRAMEF8Q5VWM4 474 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 PRAMEF7Q5VXH5 474 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 ZNF776Q68DI1 518 aaPredicted RBP7.82□□□□□ -1.16
MCPH1-201ENST00000344683 RPUSD3Q6P087 351 aaKnown RBP7.82□□□□□ -1.16
MCPH1-201ENST00000344683 PDZD3Q86UT5 571 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 SIGLEC10Q96LC7 697 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 DPH2Q9BQC3 489 aaPredicted RBP7.82□□□□□ -1.16
MCPH1-201ENST00000344683 SIX2Q9NPC8 291 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 FBXO8Q9NRD0 319 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 SLC2A9Q9NRM0 540 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 SPATA31A5Q5VU36 1347 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 SPATA31A7Q8IWB4 1347 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 FAM166BA8MTA8 275 aa7.82□□□□□ -1.16
MCPH1-201ENST00000344683 TERTO14746 1132 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms