RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 TM6SF2Q9BZW4 377 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 GABARAPL1Q9H0R8 117 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 CHST8Q9H2A9 424 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 OPA3Q9H6K4 179 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 SYNDIG1Q9H7V2 258 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 EVA1AQ9H8M9 152 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 RDH14Q9HBH5 336 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 IL26Q9NPH9 171 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 ZNF701Q9NV72 531 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-202ENST00000343599 ORC6Q9Y5N6 252 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 NCKAP5O14513 1909 aa6.7□□□□□ -1.34
ZNF540-202ENST00000343599 A0A1B0GVI7 797 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 TCRBV16S1A1N1A0A5B0 115 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 PGPEP1LA6NFU8 196 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 KLRC4-KLRK1H3BQV0 150 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 PHYHO14832 338 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 ZNF749O43361 778 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 WBP4O75554 376 aaKnown RBP6.69□□□□□ -1.34
ZNF540-202ENST00000343599 SNAPC5O75971 98 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 EBLN1P0CF75 366 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 PRR35P0CG20 571 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 PGAM1P18669 254 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 IL11P20809 199 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 DNASE1P24855 282 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 XKP51811 444 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 MLF1P58340 268 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 DNAJB13P59910 316 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 GAB1Q13480 694 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 ACER2Q5QJU3 275 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 CD276Q5ZPR3 534 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 SEZ6L2Q6UXD5 910 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 DNM1P46Q6ZS02 220 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 RFX6Q8HWS3 928 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 LRRC56Q8IYG6 542 aaPredicted RBP6.69□□□□□ -1.34
ZNF540-202ENST00000343599 HS3ST5Q8IZT8 346 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 SLC5A8Q8N695 610 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 OR11G2Q8NGC1 345 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 AKR7LQ8NHP1 331 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 WDR20Q8TBZ3 569 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 METTL6Q8TCB7 284 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 ZNF675Q8TD23 568 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 MR1Q95460 341 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 C3orf30Q96M34 536 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 MCEEQ96PE7 176 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 KCNJ15Q99712 375 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 SPRTNQ9H040 489 aaPredicted RBP6.69□□□□□ -1.34
ZNF540-202ENST00000343599 MED28Q9H204 178 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 SRMSQ9H3Y6 488 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 PLCXD1Q9NUJ7 323 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 LRFN1Q9P244 771 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 HYKKA2RU49 373 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 INMT-MINDY4F8WBC2 141 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 NR5A2O00482 541 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 ULK1O75385 1050 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 LGI1O95970 557 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 HSD3B1P14060 373 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 FOLR2P14207 255 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 CMPK1P30085 196 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 PTGFRP43088 359 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 TTPAP49638 278 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 RORCP51449 518 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 TAP2Q03519 686 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 CHRNB3Q05901 458 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 C1orf61Q13536 156 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 SMN1Q16637 294 aaKnown RBP6.69□□□□□ -1.34
ZNF540-202ENST00000343599 PRSS53Q2L4Q9 553 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 ARSJQ5FYB0 599 aaPredicted RBP6.69□□□□□ -1.34
ZNF540-202ENST00000343599 THEM4Q5T1C6 240 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 KANK2Q63ZY3 851 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 PIWIL4Q7Z3Z4 852 aaKnown RBP6.69□□□□□ -1.34
ZNF540-202ENST00000343599 L3MBTL4Q8NA19 623 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 PHOSPHO1Q8TCT1 267 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 MTERF3Q96E29 417 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 NARS2Q96I59 477 aaKnown RBP6.69□□□□□ -1.34
ZNF540-202ENST00000343599 LCORQ96JN0 433 aaPredicted RBP6.69□□□□□ -1.34
ZNF540-202ENST00000343599 COL21A1Q96P44 957 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 COPS8Q99627 209 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 SSX3Q99909 188 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 DUSP26Q9BV47 211 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 TCF7L1Q9HCS4 588 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 LYRM4Q9HD34 91 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 GLRX2Q9NS18 164 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 CUTCQ9NTM9 273 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 RBM22Q9NW64 420 aaKnown RBP eCLIP6.69□□□□□ -1.34
ZNF540-202ENST00000343599 FBXL4Q9UKA2 621 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 STUB1Q9UNE7 303 aa6.69□□□□□ -1.34
ZNF540-202ENST00000343599 FAM240BA0A1B0GVZ2 78 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 URADA6NGE7 173 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 LYRM1O43325 122 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 DLX3O60479 287 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 STX11O75558 287 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 CPEP16870 476 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 C4BPBP20851 252 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 STOMP27105 288 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 AOAHP28039 575 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 AVPR1BP47901 424 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 DHODHQ02127 395 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.68□□□□□ -1.34
ZNF540-202ENST00000343599 FOXO1Q12778 655 aa6.68□□□□□ -1.34
ZNF540-202ENST00000343599 IHHQ14623 411 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms