RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 C17orf105B2RV13 164 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 ZNF264O43296 627 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 SSX4O60224 188 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 PIAS2O75928 621 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 TPPPO94811 219 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 GBX2P52951 348 aaPredicted RBP9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 PYDC2Q56P42 97 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 LINC01590Q5TEZ4 76 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 TIGD3Q6B0B8 471 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 SFXN4Q6P4A7 337 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 ZC3H14Q6PJT7 736 aaKnown RBP9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 NCCRP1Q6ZVX7 275 aaPredicted RBP9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 PLXDC1Q8IUK5 500 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 NACC2Q96BF6 587 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 PRO3102Q9H379 93 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 RNF121Q9H920 327 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 SACM1LQ9NTJ5 587 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 CEP192Q8TEP8 1941 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 ZC3H12DA2A288 527 aaKnown RBP9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 E9PI62 339 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 SCDO00767 359 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 REM1O75628 298 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 DDAH2O95865 285 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 CD14P08571 375 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 PRKAR1AP10644 381 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 MAP2K3P46734 347 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 GFERP55789 205 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 DLX5P56178 289 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 RPS7P62081 194 aaKnown RBP9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 SQSTM1Q13501 440 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 TRIQKQ629K1 86 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 WDR74Q6RFH5 385 aaPredicted RBP9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 GATAD2AQ86YP4 633 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 LIX1LQ8IVB5 337 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 SLC35F2Q8IXU6 374 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 CADM2Q8N3J6 435 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 ZNF614Q8N883 585 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 ZNF441Q8N8Z8 693 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 PELI1Q96FA3 418 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 NEDD4LQ96PU5 975 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 MARVELD1Q9BSK0 173 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 RBCK1Q9BYM8 510 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 OR2B2Q9GZK3 357 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 SPRTNQ9H040 489 aaPredicted RBP9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 UBE2ZQ9H832 354 aaPredicted RBP9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 FKRPQ9H9S5 495 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 MMP25Q9NPA2 562 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 WNT16Q9UBV4 365 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 IER3IP1Q9Y5U9 82 aa9.8□□□□□ -0.84
TRAF3IP2-201ENST00000340026 CEP290O15078 2479 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 TDRD6O60522 2096 aaKnown RBP9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 IGHV1OR21-1A0A087WYE8 117 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 CTDSPLO15194 276 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 ATP6V1G1O75348 118 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 CCNKO75909 580 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 CLUP10909 449 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 SPI1P17947 270 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 CENPAP49450 140 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 OR12D2P58182 307 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 SIRPAP78324 504 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 GPR139Q6DWJ6 353 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 PYHIN1Q6K0P9 492 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 CDH24Q86UP0 819 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 C19orf18Q8NEA5 215 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 SHDQ96IW2 340 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 FRMD6Q96NE9 622 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 TGM7Q96PF1 710 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 PHOX2BQ99453 314 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 MIR1-1HGQ9H1L0 117 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 MARCH7Q9H992 704 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 SOHLH2Q9NX45 425 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 ZNF221Q9UK13 617 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 NOTOA8MTQ0 251 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 ALG1L2C9J202 215 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 CDC40O60508 579 aaKnown RBP eCLIP9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 TSPAN2O60636 221 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 SLC43A1O75387 559 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 UTS2O95399 124 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 PNLIPP16233 465 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 GLB1P16278 677 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 SDHAP31040 664 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 GRK6P43250 576 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 KIR2DL3P43628 341 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 CLDN20P56880 219 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 RPS11P62280 158 aaKnown RBP eCLIP9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 E2F1Q01094 437 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 ACSM3Q53FZ2 586 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 ARL9Q6T311 187 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 C5orf46Q6UWT4 87 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 SPEM1Q8N4L4 309 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 FAM160A2Q8N612 972 aaPredicted RBP9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 FAM98AQ8NCA5 519 aaKnown RBP9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 PLPP5Q8NEB5 264 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 OR6S1Q8NH40 331 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 GHSRQ92847 366 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 DAZLQ92904 295 aaKnown RBP9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 ST6GAL2Q96JF0 529 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 TGIF2Q9GZN2 237 aa9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 TTYH1Q9H313 450 aaPredicted RBP9.79□□□□□ -0.84
TRAF3IP2-201ENST00000340026 FBXL4Q9UKA2 621 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms