RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ZNF84P51523 738 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 RPS15P62841 145 aaKnown RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 RPS25P62851 125 aaKnown RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 IL20RBQ6UXL0 311 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 GALNTL5Q7Z4T8 443 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 SPEM1Q8N4L4 309 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 OR52N1Q8NH53 320 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 PFN4Q8NHR9 129 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 TMEM41AQ96HV5 264 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 A3GALT2U3KPV4 340 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 EML2O95834 649 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 CYB5AP00167 134 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 P04436 131 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 HOXC4P09017 264 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 S100A7P31151 101 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 SFTPDP35247 375 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 DCDP81605 110 aaKnown RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 GLO1Q04760 184 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 VWA2Q5GFL6 755 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 AGAP6Q5VW22 663 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 AGBL5Q8NDL9 886 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 Q96M85 177 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 AGAP4Q96P64 663 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 HIST1H2AAQ96QV6 131 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 MMP28Q9H239 520 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 PATJQ8NI35 1801 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 TRAV6A0A075B6T7 132 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 A0A1B0GVC2 190 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 A6NIN4 97 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 A6NIZ1 184 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 ZNF208O43345 1280 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 HPGDSO60760 199 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 HCKP08631 526 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 RAP1BP61224 184 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 RAP1AP62834 184 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 CARD17Q5XLA6 110 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 PRSS41Q7RTY9 318 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 STT3BQ8TCJ2 826 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 SLC2A12Q8TD20 617 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 ASB15Q8WXK1 588 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 GHSRQ92847 366 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 ACTR6Q9GZN1 396 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 GPRIN2O60269 458 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 FAM53BQ14153 422 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 SCGB2B2Q4G0G5 96 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 SOWAHCQ53LP3 525 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 ALKBH2Q6NS38 261 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 NRARPQ7Z6K4 114 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 ABI3BPQ7Z7G0 1075 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 ATG5Q9H1Y0 275 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 SLC25A19Q9HC21 320 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 EXO1Q9UQ84 846 aaKnown RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 AHCTF1Q8WYP5 2266 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 SLC2A10O95528 541 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 ITGA5P08648 1049 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 PSMA6P60900 246 aaKnown RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 SIRPAP78324 504 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 PRKCDQ05655 676 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 EIF2B1Q14232 305 aaKnown RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 SLC35F3Q8IY50 421 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 OR2L13Q8N349 312 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 SNIP1Q8TAD8 396 aaKnown RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 ADAMTS14Q8WXS8 1223 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 CMC2Q9NRP2 79 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 KLHL9Q9P2J3 617 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 POMT2Q9UKY4 750 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 TRAV18A0A075B6X5 111 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 HTR3EA5X5Y0 456 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 VAMP1P23763 118 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 APEX1P27695 318 aaKnown RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 MAN2A2P49641 1150 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 FXNQ16595 210 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 XAF1Q6GPH4 301 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 RPL22L1Q6P5R6 122 aaKnown RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 LSM14AQ8ND56 463 aaKnown RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 ELF4Q99607 663 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-202ENST00000338368 GLS2Q9UI32 602 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 POLHQ9Y253 713 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 V9GY05 133 aa5.81□□□□□ -1.48
PRKDC-202ENST00000338368 TRBV11-1A0A0K0K1C0 115 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 TMEM129A0AVI4 362 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 OR2W5A6NFC9 320 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 MBTPS2O43462 519 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ZNF432O94892 652 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 SBK2P0C263 348 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 OR2T7P0C7T2 308 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ETV5P41161 510 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 PITPNBP48739 271 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ETV1P50549 477 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 AQP6Q13520 282 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 STEAP3Q658P3 488 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 BAIAP2L2Q6UXY1 529 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 OR2T27Q8NH04 317 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 OR5B2Q96R09 309 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 OR6C1Q96RD1 312 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 UCKL1Q9NWZ5 548 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 MYOFQ9NZM1 2061 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 PRKNO60260 465 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 TGFBR1P36897 503 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 GPLD1P80108 840 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms