RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CALML5Q9NZT1 146 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 HAO1Q9UJM8 370 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 PRDM4Q9UKN5 801 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 ZNF232Q9UNY5 417 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 ROS1P08922 2347 aa9.39□□□□□ -0.91
CAPN3-202ENST00000337571 USF3Q68DE3 2245 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 GOLGA8QA0A0J9YX86 632 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 A0A1W2PR80 420 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 PRAMEF27A3QJZ7 478 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 GOLGA8OA6NCC3 632 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 GOLGA8NF8WBI6 632 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 J3QL48 77 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 HDAC3O15379 428 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 TLX2O43763 284 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-202ENST00000337571 ADAM11O75078 769 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 BCAS1O75363 584 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-202ENST00000337571 CRLF1O75462 422 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 SLC22A3O75751 556 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 CD8AP01732 235 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 IGHV4-39P01824 125 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 GPIP06744 558 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 KITP10721 976 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 IDO1P14902 403 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 PTNP21246 168 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 CD40P25942 277 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 CRATP43155 626 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 NUDT6P53370 316 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 DSCR9P59020 149 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 H3F3AP84243 136 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 CHRNB3Q05901 458 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 FUT5Q11128 374 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 MPP2Q14168 576 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 GABRA6Q16445 453 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 ZSWIM7Q19AV6 140 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 ATG16L1Q676U5 607 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 KLHL24Q6TFL4 600 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 SEZ6L2Q6UXD5 910 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 ABHD12BQ7Z5M8 362 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-202ENST00000337571 DTX2Q86UW9 622 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 MUC15Q8N387 334 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 OR52P1PQ8NH57 321 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 PNPT1Q8TCS8 783 aaKnown RBP9.38□□□□□ -0.91
CAPN3-202ENST00000337571 ZBTB9Q96C00 473 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 TEX37Q96LM6 180 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 TAPBPLQ9BX59 468 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 C1QTNF6Q9BXI9 259 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 SLC38A1Q9H2H9 487 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 WDR55Q9H6Y2 383 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-202ENST00000337571 RMND5AQ9H871 391 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 YAE1D1Q9NRH1 226 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 CBLN4Q9NTU7 201 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 NPAP1Q9NZP6 1156 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 P2RX2Q9UBL9 471 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 MALT1Q9UDY8 824 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 OSGIN1Q9UJX0 560 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 GDF2Q9UK05 429 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-202ENST00000337571 B3GALT5Q9Y2C3 310 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 SLC25A15Q9Y619 301 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 ATP23Q9Y6H3 246 aa9.38□□□□□ -0.91
CAPN3-202ENST00000337571 PRR14LQ5THK1 2151 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 TMEM72A0PK05 275 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 KIAA1324LA8MWY0 1029 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-202ENST00000337571 E7EQL1 145 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 FAAHO00519 579 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 SDHDO14521 159 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 NDUFS7O75251 213 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 WNT11O96014 354 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 IFNA2P01563 188 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 CHRM4P08173 479 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 ALDOCP09972 364 aaKnown RBP9.37□□□□□ -0.91
CAPN3-202ENST00000337571 IMPDH2P12268 514 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 NCF2P19878 526 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-202ENST00000337571 EPHA3P29320 983 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 CDKN2CP42773 168 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 PRPS1P60891 318 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 EPS8Q12929 822 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 CEACAM7Q14002 265 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 LARS2Q15031 903 aaKnown RBP9.37□□□□□ -0.91
CAPN3-202ENST00000337571 COX20Q5RI15 118 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 OTUD3Q5T2D3 398 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-202ENST00000337571 MRPL2Q5T653 305 aaKnown RBP9.37□□□□□ -0.91
CAPN3-202ENST00000337571 C1QTNF12Q5T7M4 302 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 C9orf135Q5VTT2 229 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 WBP2NLQ6ICG8 309 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 PAQR6Q6TCH4 344 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 CLEC2AQ6UVW9 174 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 AAED1Q7RTV5 226 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 GPAT4Q86UL3 456 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 CADM2Q8N3J6 435 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 C17orf78Q8N4C9 275 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 C1orf162Q8NEQ5 155 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-202ENST00000337571 OR52E4Q8NGH9 312 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 MGARPQ8TDB4 240 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 ITCHQ96J02 903 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 SF3B5Q9BWJ5 86 aaKnown RBP9.37□□□□□ -0.91
CAPN3-202ENST00000337571 CACNG6Q9BXT2 260 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 ADAM19Q9H013 955 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 THUMPD1Q9NXG2 353 aaKnown RBP9.37□□□□□ -0.91
CAPN3-202ENST00000337571 DCTN4Q9UJW0 460 aa9.37□□□□□ -0.91
CAPN3-202ENST00000337571 AMDHD2Q9Y303 409 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms