RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 TMEM99Q8N816 258 aa13.56□□□□□ -0.24
FGFR1-202ENST00000335922 GHSRQ92847 366 aa13.56□□□□□ -0.24
FGFR1-202ENST00000335922 MRGPRX3Q96LB0 322 aa13.56□□□□□ -0.24
FGFR1-202ENST00000335922 LDAHQ9H6V9 325 aa13.56□□□□□ -0.24
FGFR1-202ENST00000335922 CHMP1AQ9HD42 196 aaPredicted RBP13.56□□□□□ -0.24
FGFR1-202ENST00000335922 SPHK1Q9NYA1 384 aa13.56□□□□□ -0.24
FGFR1-202ENST00000335922 PRODH2Q9UF12 536 aa13.56□□□□□ -0.24
FGFR1-202ENST00000335922 R4GN57 208 aa13.56□□□□□ -0.24
FGFR1-202ENST00000335922 A0A1W2PS29 197 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 TRAPPC13A5PLN9 417 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 CDC40O60508 579 aaKnown RBP eCLIP13.55□□□□□ -0.24
FGFR1-202ENST00000335922 RFPL3O75679 317 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 OR2I1PQ8NGU4 316 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 PDCD1LG2Q9BQ51 273 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 PINK1Q9BXM7 581 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 TCEAL2Q9H3H9 227 aaPredicted RBP13.55□□□□□ -0.24
FGFR1-202ENST00000335922 A3GALT2U3KPV4 340 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 ABCA7Q8IZY2 2146 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 WRBO00258 174 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 FZD7O75084 574 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 HOXB3P14651 431 aaPredicted RBP13.55□□□□□ -0.24
FGFR1-202ENST00000335922 NR0B1P51843 470 aaKnown RBP13.55□□□□□ -0.24
FGFR1-202ENST00000335922 FAM76BQ5HYJ3 339 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 LINC00299Q6ZSB3 139 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 FAM109AQ8N4B1 249 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 PFN4Q8NHR9 129 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 CPNE2Q96FN4 548 aaPredicted RBP13.55□□□□□ -0.24
FGFR1-202ENST00000335922 GPATCH2Q9NW75 528 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 A0A1B0GV50 99 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 A8MVJ9 347 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 TFP02787 698 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 CLUP10909 449 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 DDOSTP39656 456 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 CHAF1BQ13112 559 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 MRPL2Q5T653 305 aaKnown RBP13.55□□□□□ -0.24
FGFR1-202ENST00000335922 FAAP20Q6NZ36 180 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 SYT13Q7L8C5 426 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 CLDN22Q8N7P3 220 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 ANKRD53Q8N9V6 530 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 AGBL5Q8NDL9 886 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 THAP4Q8WY91 577 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 MICU1Q9BPX6 476 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 MTHFD2LQ9H903 347 aaPredicted RBP13.55□□□□□ -0.24
FGFR1-202ENST00000335922 NDUFB11Q9NX14 153 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 ERVK-19Q9WJR5 959 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 HS3ST3A1Q9Y663 406 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 PLXNA1Q9UIW2 1896 aa13.55□□□□□ -0.24
FGFR1-202ENST00000335922 FFAR1O14842 300 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 UCHL1P09936 223 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 RBM34P42696 430 aaKnown RBP13.54□□□□□ -0.24
FGFR1-202ENST00000335922 RPS5P46782 204 aaKnown RBP13.54□□□□□ -0.24
FGFR1-202ENST00000335922 ERVK-25P63136 954 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 RFPL4BQ6ZWI9 263 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 ETFBKMTQ8IXQ9 262 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 GIMAP1Q8WWP7 306 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 METTL2AQ96IZ6 378 aaKnown RBP13.54□□□□□ -0.24
FGFR1-202ENST00000335922 ZNF350Q9GZX5 532 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 CLEC3AO75596 197 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 TEAD1P28347 426 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 CRYBB2P43320 205 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 GPLD1P80108 840 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 GPR176Q14439 515 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 KCNAB1Q14722 419 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 SMAD2Q15796 467 aaKnown RBP13.54□□□□□ -0.24
FGFR1-202ENST00000335922 C3orf38Q5JPI3 329 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 OR2L8Q8NGY9 312 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 DIO2Q92813 273 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 OR6C1Q96RD1 312 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 TNFRSF13CQ96RJ3 184 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 UBQLN3Q9H347 655 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 EPHA6Q9UF33 1036 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 EDARQ9UNE0 448 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 A0A1W2PR48 441 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 EFCAB7A8K855 629 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 RNF13O43567 381 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 GLULP15104 373 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 SNRPGP62308 76 aaKnown RBP13.54□□□□□ -0.24
FGFR1-202ENST00000335922 CSNK1G2P78368 415 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 COL28A1Q2UY09 1125 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 PDZD9Q8IXQ8 264 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 OR4D11Q8NGI4 311 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 SERINC1Q9NRX5 453 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 CLEC1BQ9P126 229 aa13.54□□□□□ -0.24
FGFR1-202ENST00000335922 RABL2AQ9UBK7 228 aaPredicted RBP13.54□□□□□ -0.24
FGFR1-202ENST00000335922 H7C1C5 153 aa13.53□□□□□ -0.24
FGFR1-202ENST00000335922 BCL6P41182 706 aa13.53□□□□□ -0.24
FGFR1-202ENST00000335922 MRPL19P49406 292 aaKnown RBP13.53□□□□□ -0.24
FGFR1-202ENST00000335922 LCN6P62502 163 aa13.53□□□□□ -0.24
FGFR1-202ENST00000335922 ALKAL2Q6UX46 152 aa13.53□□□□□ -0.24
FGFR1-202ENST00000335922 SIAH3Q8IW03 269 aa13.53□□□□□ -0.24
FGFR1-202ENST00000335922 SLC6A7Q99884 636 aa13.53□□□□□ -0.24
FGFR1-202ENST00000335922 FKBP14Q9NWM8 211 aa13.53□□□□□ -0.24
FGFR1-202ENST00000335922 EEF1E1-BLOC1S5C9J1V9 151 aa13.53□□□□□ -0.24
FGFR1-202ENST00000335922 FCRLAQ7L513 359 aa13.53□□□□□ -0.24
FGFR1-202ENST00000335922 GAL3ST3Q96A11 431 aa13.53□□□□□ -0.24
FGFR1-202ENST00000335922 OR14A2Q96R54 314 aa13.53□□□□□ -0.24
FGFR1-202ENST00000335922 SEC61A2Q9H9S3 476 aa13.53□□□□□ -0.24
FGFR1-202ENST00000335922 WNT16Q9UBV4 365 aa13.53□□□□□ -0.24
FGFR1-202ENST00000335922 LAMP5Q9UJQ1 280 aa13.53□□□□□ -0.24
FGFR1-202ENST00000335922 CDHR4A6H8M9 788 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms