RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SWI5Q1ZZU3 235 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 CDONQ4KMG0 1287 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 ETFBKMTQ8IXQ9 262 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 ZNF615Q8N8J6 731 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 TMIEQ8NEW7 156 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 ABHD4Q8TB40 342 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 FAM83CQ9BQN1 747 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 ZNF436Q9C0F3 470 aaPredicted RBP11.72□□□□□ -0.53
RETREG3-201ENST00000309428 CHST8Q9H2A9 424 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 LHX9Q9NQ69 397 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 MBD2Q9UBB5 411 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 SCP2D1Q9UJQ7 156 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 GPR34Q9UPC5 381 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 PIAS3Q9Y6X2 628 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 TTC28Q96AY4 2481 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 PLXNA4Q9HCM2 1894 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 CDHR4A6H8M9 788 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 B3GALT2O43825 422 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 PEX14O75381 377 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 CBR1P16152 277 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 PCSK2P16519 638 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 COL9A1P20849 921 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 RAD52P43351 418 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 CAPZA2P47755 286 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 GPR18Q14330 331 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 ZNF169Q14929 603 aaPredicted RBP11.72□□□□□ -0.53
RETREG3-201ENST00000309428 HBMQ6B0K9 141 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 ABHD17CQ6PCB6 329 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 QSOX2Q6ZRP7 698 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 ASPGQ86U10 573 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 LIX1LQ8IVB5 337 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 DNAAF1Q8NEP3 725 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 OR4N2Q8NGD1 307 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 OR4K14Q8NGD5 310 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 SMPDL3BQ92485 455 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 RBM18Q96H35 190 aaKnown RBP11.72□□□□□ -0.53
RETREG3-201ENST00000309428 DERL3Q96Q80 235 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 C7orf50Q9BRJ6 194 aaKnown RBP11.72□□□□□ -0.53
RETREG3-201ENST00000309428 TRAF4Q9BUZ4 470 aaPredicted RBP11.72□□□□□ -0.53
RETREG3-201ENST00000309428 KLK11Q9UBX7 282 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 MDC1Q14676 2089 aaKnown RBP11.72□□□□□ -0.53
RETREG3-201ENST00000309428 DUSP5Q16690 384 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 JAZF1Q86VZ6 243 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 PLPP6Q8IY26 295 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 BEST3Q8N1M1 668 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 AIFM2Q9BRQ8 373 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 RSPO3Q9BXY4 272 aaPredicted RBP11.72□□□□□ -0.53
RETREG3-201ENST00000309428 TMEM38AQ9H6F2 299 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 ACSL5Q9ULC5 683 aa11.72□□□□□ -0.53
RETREG3-201ENST00000309428 GXYLT2A0PJZ3 443 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 GPR171O14626 319 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 P2RX6O15547 441 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 ZNF432O94892 652 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 EFEMP2O95967 443 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 IFNA6P05013 189 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 ACSM4P0C7M7 580 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 ZNF35P13682 527 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 ARL4DP49703 201 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 MC2RQ01718 297 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 GFOD2Q3B7J2 385 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 FBXO46Q6PJ61 603 aaPredicted RBP11.71□□□□□ -0.53
RETREG3-201ENST00000309428 FIGLAQ6QHK4 219 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 ZNF322Q6U7Q0 402 aaPredicted RBP11.71□□□□□ -0.53
RETREG3-201ENST00000309428 Q6ZSR6 202 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 SPAG16Q8N0X2 631 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 FAM26EQ8N5C1 309 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 OR4C15Q8NGM1 316 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 C1QTNF7Q9BXJ2 289 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 ZNF346Q9UL40 294 aaKnown RBP11.71□□□□□ -0.53
RETREG3-201ENST00000309428 PLXNA3P51805 1871 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 TVP23AA6NH52 213 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 A8MVJ9 347 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 CTSVO60911 334 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 CFDP00746 253 aaPredicted RBP11.71□□□□□ -0.53
RETREG3-201ENST00000309428 PSMB1P20618 241 aaKnown RBP11.71□□□□□ -0.53
RETREG3-201ENST00000309428 NFYAP23511 347 aaPredicted RBP11.71□□□□□ -0.53
RETREG3-201ENST00000309428 NTSR1P30989 418 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 GNALP38405 381 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 TPMTP51580 245 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 ST3GAL2Q16842 350 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 AVL9Q8NBF6 648 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 OR2L5Q8NG80 312 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 OR11H7Q8NGC8 314 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 SLC25A36Q96CQ1 311 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 LINC00052Q96N35 136 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 ATPIF1Q9UII2 106 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 ATXN7L1Q9ULK2 861 aaPredicted RBP11.71□□□□□ -0.53
RETREG3-201ENST00000309428 HRH3Q9Y5N1 445 aa11.71□□□□□ -0.53
RETREG3-201ENST00000309428 A0A1W2PPV9 198 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 EPOPA6NHQ4 379 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 SERPINA3P01011 423 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 OPN1LWP04000 364 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 RLN2P04090 185 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 TEAD1P28347 426 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 TMEM44Q2T9K0 475 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 SLC22A10Q63ZE4 541 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 HEPHL1Q6MZM0 1159 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 Q6ZS52 159 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 GID4Q8IVV7 300 aa11.71□□□□□ -0.54
RETREG3-201ENST00000309428 GJD3Q8N144 294 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms