RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 GALNT10Q86SR1 603 aa14.27□□□□□ -0.12
LEMD3-201ENST00000308330 GLCCI1Q86VQ1 547 aa14.27□□□□□ -0.12
LEMD3-201ENST00000308330 C2CD4AQ8NCU7 369 aaPredicted RBP14.27□□□□□ -0.12
LEMD3-201ENST00000308330 BPIFA2Q96DR5 249 aa14.27□□□□□ -0.12
LEMD3-201ENST00000308330 FEVQ99581 238 aa14.27□□□□□ -0.12
LEMD3-201ENST00000308330 DERL2Q9GZP9 239 aa14.27□□□□□ -0.12
LEMD3-201ENST00000308330 ARV1Q9H2C2 271 aa14.27□□□□□ -0.12
LEMD3-201ENST00000308330 MAN2C1Q9NTJ4 1040 aa14.27□□□□□ -0.12
LEMD3-201ENST00000308330 F11P03951 625 aa14.27□□□□□ -0.13
LEMD3-201ENST00000308330 MMP2P08253 660 aa14.27□□□□□ -0.13
LEMD3-201ENST00000308330 CD80P33681 288 aa14.27□□□□□ -0.13
LEMD3-201ENST00000308330 AKR1C3P42330 323 aa14.27□□□□□ -0.13
LEMD3-201ENST00000308330 HNRNPA3P51991 378 aaKnown RBP14.27□□□□□ -0.13
LEMD3-201ENST00000308330 RAB11BQ15907 218 aa14.27□□□□□ -0.13
LEMD3-201ENST00000308330 PLEKHN1Q494U1 663 aaPredicted RBP14.27□□□□□ -0.13
LEMD3-201ENST00000308330 XAF1Q6GPH4 301 aa14.27□□□□□ -0.13
LEMD3-201ENST00000308330 MOB1BQ7L9L4 216 aa14.27□□□□□ -0.13
LEMD3-201ENST00000308330 C1orf87Q8N0U7 546 aa14.27□□□□□ -0.13
LEMD3-201ENST00000308330 TMEM156Q8N614 296 aa14.27□□□□□ -0.13
LEMD3-201ENST00000308330 PNLDC1Q8NA58 520 aaKnown RBP14.27□□□□□ -0.13
LEMD3-201ENST00000308330 SLC39A7Q92504 469 aa14.27□□□□□ -0.13
LEMD3-201ENST00000308330 TGM7Q96PF1 710 aa14.27□□□□□ -0.13
LEMD3-201ENST00000308330 CNOT2Q9NZN8 540 aaKnown RBP14.27□□□□□ -0.13
LEMD3-201ENST00000308330 A0A1B0GV72 72 aa14.27□□□□□ -0.13
LEMD3-201ENST00000308330 PRICKLE3O43900 615 aaPredicted RBP14.27□□□□□ -0.13
LEMD3-201ENST00000308330 MOGAT2Q3SYC2 334 aa14.27□□□□□ -0.13
LEMD3-201ENST00000308330 TNFAIP8L2Q6P589 184 aaPredicted RBP14.27□□□□□ -0.13
LEMD3-201ENST00000308330 CREB3L4Q8TEY5 395 aa14.27□□□□□ -0.13
LEMD3-201ENST00000308330 PDXPQ96GD0 296 aa14.27□□□□□ -0.13
LEMD3-201ENST00000308330 PATZ1Q9HBE1 687 aaKnown RBP14.27□□□□□ -0.13
LEMD3-201ENST00000308330 ZDBF2Q9HCK1 2354 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 SLC22A23A1A5C7 686 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 OR6C68A6NDL8 312 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 GPR171O14626 319 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 ENGP17813 658 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 CCKBRP32239 447 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 NAA10P41227 235 aaPredicted RBP14.26□□□□□ -0.13
LEMD3-201ENST00000308330 CRISP1P54107 249 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 TAS2R43P59537 309 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 ISL1P61371 349 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 MEF2AQ02078 507 aaPredicted RBP14.26□□□□□ -0.13
LEMD3-201ENST00000308330 SLC17A1Q14916 467 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 MANEAQ5SRI9 462 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 LGR4Q9BXB1 951 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 A6NCN8 305 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 CXorf65A6NEN9 183 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 NCBP2P52298 156 aaKnown RBP eCLIP14.26□□□□□ -0.13
LEMD3-201ENST00000308330 SOWAHCQ53LP3 525 aaPredicted RBP14.26□□□□□ -0.13
LEMD3-201ENST00000308330 SLC16A12Q6ZSM3 486 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 NAXDQ8IW45 347 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 GEMIN6Q8WXD5 167 aaKnown RBP14.26□□□□□ -0.13
LEMD3-201ENST00000308330 PPP1R14AQ96A00 147 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 MYNNQ9NPC7 610 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 MARCH4Q9P2E8 410 aaPredicted RBP14.26□□□□□ -0.13
LEMD3-201ENST00000308330 SIT1Q9Y3P8 196 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 DDX60Q8IY21 1712 aaKnown RBP14.26□□□□□ -0.13
LEMD3-201ENST00000308330 SFTPBP07988 381 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 WNT4P56705 351 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 SPIN4Q56A73 249 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 SUN3Q8TAQ9 357 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 MR1Q95460 341 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 RAB24Q969Q5 203 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 IL17FQ96PD4 163 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 UBE2ZQ9H832 354 aaPredicted RBP14.26□□□□□ -0.13
LEMD3-201ENST00000308330 LYRM2Q9NU23 88 aaPredicted RBP14.26□□□□□ -0.13
LEMD3-201ENST00000308330 LUZP4Q9P127 313 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 RCE1Q9Y256 329 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 ABLIM3O94929 683 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 HTR2CP28335 458 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 H3F3AP84243 136 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 ARL6IP1Q15041 203 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 SLC9A3R2Q15599 337 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 PRR27Q6MZM9 219 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 THNSL2Q86YJ6 484 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 SMPDL3BQ92485 455 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 PSORS1C1Q9UIG5 152 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 WIF1Q9Y5W5 379 aa14.26□□□□□ -0.13
LEMD3-201ENST00000308330 ZNF726A6NNF4 738 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 DUX1O43812 170 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 CXCL10P02778 98 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 GBAP04062 536 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 ITGB8P26012 769 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 ACRV1P26436 265 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 RABIFP47224 123 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 CAV3P56539 151 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 SCGB2A2Q13296 93 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 SEZ6L2Q6UXD5 910 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 RPS27LQ71UM5 84 aaKnown RBP14.25□□□□□ -0.13
LEMD3-201ENST00000308330 OR5L2Q8NGL0 311 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 ZNF354BQ96LW1 612 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 DPH7Q9BTV6 452 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 CACNA1GO43497 2377 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 ANKRD12Q6UB98 2062 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 A0A0U1RQS6 177 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 ZNF860A6NHJ4 632 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 HRO43593 1189 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 MT-ND5P03915 603 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 CLDN2P57739 230 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 P2RY14Q15391 338 aa14.25□□□□□ -0.13
LEMD3-201ENST00000308330 ZNF239Q16600 458 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms