RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CAMLGP49069 296 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 RACK1P63244 317 aaKnown RBP14.81□□□□□ -0.04
USP42-201ENST00000306177 ZNF695Q8IW36 515 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 RSC1A1Q92681 617 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 OR6C1Q96RD1 312 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 PBDC1Q9BVG4 233 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 OR51J1Q9H342 316 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 FGF21Q9NSA1 209 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 SIDT1Q9NXL6 827 aaKnown RBP14.81□□□□□ -0.04
USP42-201ENST00000306177 NXT1Q9UKK6 140 aaKnown RBP14.81□□□□□ -0.04
USP42-201ENST00000306177 RAB40ALP0C0E4 278 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 SLC1A3P43003 542 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 SPOCK1Q08629 439 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 NXNL2Q5VZ03 156 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 RAB40AQ8WXH6 277 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 PDXPQ96GD0 296 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 SGCZQ96LD1 299 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 A0A1B0GTW7 788 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 CDHR4A6H8M9 788 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 TMEM202A6NGA9 273 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 DUSP6Q16828 381 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 RTL6Q6ICC9 239 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 MFSD12Q6NUT3 480 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 MED25Q71SY5 747 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 GLYATL2Q8WU03 294 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 ELP4Q96EB1 424 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 TEX37Q96LM6 180 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 SLC6A18Q96N87 628 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 ZNF582Q96NG8 517 aaPredicted RBP14.8□□□□□ -0.04
USP42-201ENST00000306177 SORCS2Q96PQ0 1159 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 NUDT22Q9BRQ3 303 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 ANKRD19PQ9H560 264 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 MBNL1Q9NR56 388 aaKnown RBP14.8□□□□□ -0.04
USP42-201ENST00000306177 A0A1W2PQ09 198 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 PLPP1O14494 284 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 UTS2O95399 124 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 OR2T7P0C7T2 308 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 ZNF26P17031 533 aaPredicted RBP14.8□□□□□ -0.04
USP42-201ENST00000306177 TMEM176BQ3YBM2 270 aaPredicted RBP14.8□□□□□ -0.04
USP42-201ENST00000306177 SLC22A6Q4U2R8 563 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 GTPBP8Q8N3Z3 284 aaPredicted RBP14.8□□□□□ -0.04
USP42-201ENST00000306177 OR2T27Q8NH04 317 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 HINT2Q9BX68 163 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 VN1R3Q9BXE9 311 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 ARHGAP33O14559 1287 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 YKT6O15498 198 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 ARPC5O15511 151 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 TUBG1P23258 451 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 GABRR1P24046 479 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 SLC5A2P31639 672 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 TPMTP51580 245 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 LTBQ06643 244 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 OR9K2Q8NGE7 335 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 OR5L1Q8NGL2 311 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 OLIG1Q8TAK6 271 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 ALG12Q9BV10 488 aa14.8□□□□□ -0.04
USP42-201ENST00000306177 DHCR7Q9UBM7 475 aaKnown RBP14.8□□□□□ -0.04
USP42-201ENST00000306177 MEIS3P1A6NDR6 274 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 K7ESM1 405 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 SSX5O60225 188 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 SCGB2A1O75556 95 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 APOC3P02656 99 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 TFAP2AP05549 437 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 CD27P26842 260 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 DPTQ07507 201 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 SMAD2Q15796 467 aaKnown RBP14.79□□□□□ -0.04
USP42-201ENST00000306177 OR7G1Q8NGA0 311 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 MED20Q9H944 212 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 PLEKHM1Q9Y4G2 1056 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 RREB1Q92766 1687 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 A0A1B0GWA3 101 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 SLC43A1O75387 559 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 CHRM4P08173 479 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 CD46P15529 392 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 ADPRHP54922 357 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 STK11Q15831 433 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 PLCXD3Q63HM9 321 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 STEAP2Q8NFT2 490 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 OR1J4Q8NGS1 313 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 RHOXF1Q8NHV9 184 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 SENP5Q96HI0 755 aaPredicted RBP14.79□□□□□ -0.04
USP42-201ENST00000306177 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.79□□□□□ -0.04
USP42-201ENST00000306177 HEMK1Q9Y5R4 338 aaPredicted RBP14.79□□□□□ -0.04
USP42-201ENST00000306177 MYO10Q9HD67 2058 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 TRAV36DV7A0A075B6V5 113 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 GFYI3L273 518 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 DVL2O14641 736 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 SLC16A6O15403 523 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 S100PP25815 95 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 AQP2P41181 271 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 ATP1B3P54709 279 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 PLK5Q496M5 336 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 ENTHD1Q8IYW4 607 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 MAFIPQ8WZ33 124 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 DCUN1D4Q92564 292 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 ZNF566Q969W8 418 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 KCTD12Q96CX2 325 aaKnown RBP14.79□□□□□ -0.04
USP42-201ENST00000306177 ELMOD3Q96FG2 381 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 TMEM68Q96MH6 324 aa14.79□□□□□ -0.04
USP42-201ENST00000306177 NAA50Q9GZZ1 169 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms