RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CSN1S1P47710 185 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 MTCP1P56278 107 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 SELENOWP63302 87 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 POU3F1Q03052 451 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-201ENST00000302528 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.72□□□□□ -0.85
CLIP1-201ENST00000302528 LCN8Q6JVE9 175 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 MKRN2Q9H000 416 aaKnown RBP9.72□□□□□ -0.85
CLIP1-201ENST00000302528 NIPAL2Q9H841 368 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 TRBV11-1A0A0K0K1C0 115 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 AQP7O14520 342 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 GYPBP06028 91 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 CD63P08962 238 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 OR8U8P0C7N1 319 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 CT45A10P0DMU9 189 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 RUNX3Q13761 415 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 SNTB1Q13884 538 aaKnown RBP9.72□□□□□ -0.85
CLIP1-201ENST00000302528 NR0B2Q15466 257 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 GPR19Q15760 415 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 PIP5KL1Q5T9C9 394 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 KDF1Q8NAX2 398 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-201ENST00000302528 SIMC1Q8NDZ2 872 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 OR56B1Q8NGI3 324 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 TANKQ92844 425 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 RANBP9Q96S59 729 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF337Q9Y3M9 751 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 NFYBP25208 207 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 RAP2BP61225 183 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 RAB40BQ12829 278 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 CLINT1Q14677 625 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 DEFB133Q30KQ1 61 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 FAM26DQ5JW98 314 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 SHISA4Q96DD7 197 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 APIPQ96GX9 242 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 ARPC5LQ9BPX5 153 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 MCOLN1Q9GZU1 580 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 ELOVL3Q9HB03 270 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 RBPJLQ9UBG7 517 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 SRPK3Q9UPE1 567 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 LHX6Q9UPM6 363 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 RCE1Q9Y256 329 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 MEIOCA2RUB1 952 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 RAB27BO00194 218 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 TERTO14746 1132 aaKnown RBP9.71□□□□□ -0.85
CLIP1-201ENST00000302528 PPP1R2P9O14990 202 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 PPP3CBP16298 524 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 ACKR3P25106 362 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 CPOXP36551 454 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 EDDM3BP56851 147 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 PGAP1Q75T13 922 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 NDUFAF7Q7L592 441 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 RABEPKQ7Z6M1 372 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 WDR5BQ86VZ2 330 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 MFSD6LQ8IWD5 586 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 SLC7A5P1Q8MH63 180 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 MMP21Q8N119 569 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 ACVR1CQ8NER5 493 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 PEBP4Q96S96 227 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 ELF4Q99607 663 aaPredicted RBP9.71□□□□□ -0.85
CLIP1-201ENST00000302528 C1QTNF2Q9BXJ5 285 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 BABAM2Q9NXR7 383 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 TMEM184BQ9Y519 407 aaPredicted RBP9.71□□□□□ -0.85
CLIP1-201ENST00000302528 ENTPD2Q9Y5L3 495 aa9.71□□□□□ -0.85
CLIP1-201ENST00000302528 TMEM82A0PJX8 343 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 GPR39O43194 453 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 RPL7P18124 248 aaKnown RBP9.71□□□□□ -0.86
CLIP1-201ENST00000302528 CNR1P21554 472 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 HNRNPA2B1P22626 353 aaKnown RBP9.71□□□□□ -0.86
CLIP1-201ENST00000302528 RPS5P46782 204 aaKnown RBP9.71□□□□□ -0.86
CLIP1-201ENST00000302528 SRPXP78539 464 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 OR4D1Q15615 310 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 LTB4RQ15722 352 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 C18orf21Q32NC0 220 aaPredicted RBP9.71□□□□□ -0.86
CLIP1-201ENST00000302528 LPCAT3Q6P1A2 487 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 ALKAL2Q6UX46 152 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 SSX7Q7RTT5 188 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 MEX3DQ86XN8 651 aaKnown RBP9.71□□□□□ -0.86
CLIP1-201ENST00000302528 TMEM217Q8N7C4 229 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 ADAMTS16Q8TE57 1224 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 ASB17Q8WXJ9 295 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 CORO2AQ92828 525 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF582Q96NG8 517 aaPredicted RBP9.71□□□□□ -0.86
CLIP1-201ENST00000302528 NUDT22Q9BRQ3 303 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 INPP5KQ9BT40 448 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 TM7SF3Q9NS93 570 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF230Q9UIE0 474 aaPredicted RBP9.71□□□□□ -0.86
CLIP1-201ENST00000302528 TRAV27A0A087WT01 109 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 NSG1A0A0A6YYJ2 146 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 A0A0J9YY10 115 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 FDXRP22570 491 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 AADACP22760 399 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 RING1Q06587 406 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 UBE2NLQ5JXB2 153 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 C18orf63Q68DL7 685 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 CNTN4Q8IWV2 1026 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 FAM185AQ8N0U4 392 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 OR1J2Q8NGS2 313 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 IGSF8Q969P0 613 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 ADOQ96SZ5 270 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 DHRS9Q9BPW9 319 aa9.71□□□□□ -0.86
CLIP1-201ENST00000302528 RNF32Q9H0A6 362 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms