RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 NRIP3Q9NQ35 241 aa20.7■□□□□ 0.91
VSTM4-201ENST00000298454 MYOTQ9UBF9 498 aa20.7■□□□□ 0.91
VSTM4-201ENST00000298454 HTR3EA5X5Y0 456 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 SLC22A31A6NKX4 558 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 CDX4O14627 284 aaPredicted RBP20.7■□□□□ 0.9
VSTM4-201ENST00000298454 LRRTM2O43300 516 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 KLF7O75840 302 aaPredicted RBP20.7■□□□□ 0.9
VSTM4-201ENST00000298454 LALBAP00709 142 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 GP1BBP13224 206 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 PSMA1P25786 263 aaKnown RBP20.7■□□□□ 0.9
VSTM4-201ENST00000298454 CRYBB2P43320 205 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 RPS5P46782 204 aaKnown RBP20.7■□□□□ 0.9
VSTM4-201ENST00000298454 CLDN6P56747 220 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 ERVK-25P63136 954 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 COL28A1Q2UY09 1125 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 SLC15A4Q8N697 577 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 TMEM99Q8N816 258 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 KBTBD8Q8NFY9 601 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 GPR119Q8TDV5 335 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 LIPHQ8WWY8 451 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 TAAR8Q969N4 342 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 TBX5Q99593 518 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 KATNB1Q9BVA0 655 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 GALNT9Q9HCQ5 603 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 HIF3AQ9Y2N7 669 aa20.7■□□□□ 0.9
VSTM4-201ENST00000298454 C12orf71A8MTZ7 269 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 B4DXG7 233 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 CDC40O60508 579 aaKnown RBP eCLIP20.69■□□□□ 0.9
VSTM4-201ENST00000298454 CYC1P08574 325 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 MRPL3P09001 348 aaKnown RBP20.69■□□□□ 0.9
VSTM4-201ENST00000298454 TSPAN19P0C672 248 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 ASAH2BP0C7U1 165 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 PRPS1P60891 318 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.69■□□□□ 0.9
VSTM4-201ENST00000298454 PCOLCEQ15113 449 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 ZNF517Q6ZMY9 492 aaPredicted RBP20.69■□□□□ 0.9
VSTM4-201ENST00000298454 GHDCQ8N2G8 530 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 JAM3Q9BX67 310 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 OCEL1Q9H607 264 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 COL27A1Q8IZC6 1860 aaPredicted RBP20.69■□□□□ 0.9
VSTM4-201ENST00000298454 LOC102723996A0A087X1L8 192 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 A0A1B0GVG6 124 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 C9J4A7 227 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 IMPA2O14732 288 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 OR2J2O76002 312 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 CD59P13987 128 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 ZNF829Q3KNS6 432 aaPredicted RBP20.69■□□□□ 0.9
VSTM4-201ENST00000298454 C1QL3Q5VWW1 255 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 KLHL36Q8N4N3 616 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 ZFP41Q8N8Y5 198 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 SPRYD4Q8WW59 207 aaPredicted RBP20.69■□□□□ 0.9
VSTM4-201ENST00000298454 TMEM203Q969S6 136 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 TMCO6Q96DC7 493 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 SEC14L4Q9UDX3 406 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 STUB1Q9UNE7 303 aa20.69■□□□□ 0.9
VSTM4-201ENST00000298454 B4E171 279 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 TSPAN7P41732 249 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 BTBD16Q32M84 506 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 BICRALQ6AI39 1079 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 ACBD7Q8N6N7 88 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 SMAP2Q8WU79 429 aaPredicted RBP20.68■□□□□ 0.9
VSTM4-201ENST00000298454 RASD2Q96D21 266 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 NMNAT3Q96T66 252 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 YARS2Q9Y2Z4 477 aaKnown RBP20.68■□□□□ 0.9
VSTM4-201ENST00000298454 LOXL2Q9Y4K0 774 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 CORINQ9Y5Q5 1042 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 KIF26BQ2KJY2 2108 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 PMS2P1A4D2B8 440 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 CELA2AP08217 269 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 ARMC4Q5T2S8 1044 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 LYPD8Q6UX82 237 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 ZPLD1Q8TCW7 415 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 GPX7Q96SL4 187 aaPredicted RBP20.68■□□□□ 0.9
VSTM4-201ENST00000298454 ISYNA1Q9NPH2 558 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 TAS2R10Q9NYW0 307 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 KLHL21Q9UJP4 597 aa20.68■□□□□ 0.9
VSTM4-201ENST00000298454 C4orf47A7E2U8 309 aa20.67■□□□□ 0.9
VSTM4-201ENST00000298454 J3QRK9 145 aa20.67■□□□□ 0.9
VSTM4-201ENST00000298454 ARPC3O15145 178 aa20.67■□□□□ 0.9
VSTM4-201ENST00000298454 TPBGQ13641 420 aa20.67■□□□□ 0.9
VSTM4-201ENST00000298454 ANKDD1AQ495B1 522 aa20.67■□□□□ 0.9
VSTM4-201ENST00000298454 ALG10Q5BKT4 473 aa20.67■□□□□ 0.9
VSTM4-201ENST00000298454 MISPQ8IVT2 679 aa20.67■□□□□ 0.9
VSTM4-201ENST00000298454 LRRC75AQ8NAA5 344 aa20.67■□□□□ 0.9
VSTM4-201ENST00000298454 OR10H4Q8NGA5 316 aa20.67■□□□□ 0.9
VSTM4-201ENST00000298454 OR51L1Q8NGJ5 315 aa20.67■□□□□ 0.9
VSTM4-201ENST00000298454 ELP5Q8TE02 316 aa20.67■□□□□ 0.9
VSTM4-201ENST00000298454 RELTQ969Z4 430 aa20.67■□□□□ 0.9
VSTM4-201ENST00000298454 DEFB126Q9BYW3 111 aa20.67■□□□□ 0.9
VSTM4-201ENST00000298454 ISG20L2Q9H9L3 353 aaKnown RBP20.67■□□□□ 0.9
VSTM4-201ENST00000298454 ADGRL4Q9HBW9 690 aa20.67■□□□□ 0.9
VSTM4-201ENST00000298454 AKAP7Q9P0M2 348 aaPredicted RBP20.67■□□□□ 0.9
VSTM4-201ENST00000298454 IGHV1-45A0A0A0MS14 117 aa20.66■□□□□ 0.9
VSTM4-201ENST00000298454 SERPINI2O75830 405 aa20.66■□□□□ 0.9
VSTM4-201ENST00000298454 F13BP05160 661 aa20.66■□□□□ 0.9
VSTM4-201ENST00000298454 SBK2P0C263 348 aa20.66■□□□□ 0.9
VSTM4-201ENST00000298454 NAGAP17050 411 aa20.66■□□□□ 0.9
VSTM4-201ENST00000298454 POLR2HP52434 150 aaKnown RBP20.66■□□□□ 0.9
VSTM4-201ENST00000298454 TMED1Q13445 227 aa20.66■□□□□ 0.9
VSTM4-201ENST00000298454 ZNF322Q6U7Q0 402 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms