RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 GAS1P54826 345 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 FOXK2Q01167 660 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 RUNX1T1Q06455 604 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 ARMCX4Q5H9R4 360 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 CXXC5Q7LFL8 322 aaKnown RBP13□□□□□ -0.33
C9orf3-202ENST00000297979 ZNF524Q96C55 264 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 DEPDC7Q96QD5 511 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 MND1Q9BWT6 205 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 CMC2Q9NRP2 79 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 UMODP07911 640 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 HSMCR30P0CW71 290 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 PGCP20142 388 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 TACR3P29371 465 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 ETV5P41161 510 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 FBXW4P57775 412 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 CBFBQ13951 182 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 SPCS2Q15005 226 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 PCOLCEQ15113 449 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 KIF26BQ2KJY2 2108 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 C3orf38Q5JPI3 329 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 SLC35F1Q5T1Q4 408 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 SLC46A3Q7Z3Q1 461 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 CPOQ8IVL8 374 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 MISPQ8IVT2 679 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 GID4Q8IVV7 300 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 BBS1Q8NFJ9 593 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 OR5M3Q8NGP4 307 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 ADAM19Q9H013 955 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 FGF20Q9NP95 211 aaPredicted RBP13□□□□□ -0.33
C9orf3-202ENST00000297979 H2AFY2Q9P0M6 372 aaPredicted RBP13□□□□□ -0.33
C9orf3-202ENST00000297979 CLEC2DQ9UHP7 191 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 ZNF337Q9Y3M9 751 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 C17orf51A8MQB3 221 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 SLC22A1O15245 554 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 KLF7O75840 302 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-202ENST00000297979 NDUFB2O95178 105 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 PPP1R3DO95685 299 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 NUDT14O95848 222 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 ZNF182P17025 639 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-202ENST00000297979 NAGAP17050 411 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 CTRB1P17538 263 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 HTR1FP30939 366 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 P2RX1P51575 399 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 E2F1Q01094 437 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 INSM1Q01101 510 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-202ENST00000297979 CTRB2Q6GPI1 263 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 TMCO6Q96DC7 493 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 MGLLQ99685 303 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 TAPBPLQ9BX59 468 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 TMEM9BQ9NQ34 198 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 LSM2Q9Y333 95 aaKnown RBP12.99□□□□□ -0.33
C9orf3-202ENST00000297979 LRRN3E7EW58 273 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 MYL12BO14950 172 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 BCL10O95999 233 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 MYL12AP19105 171 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 ARHGAP11AQ6P4F7 1023 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 LRRC17Q8N6Y2 441 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 NANOGP1Q8N7R0 232 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 PROKR2Q8NFJ6 384 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 OR2Y1Q8NGV0 311 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 HGDQ93099 445 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 OTULINQ96BN8 352 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 RACGAP1Q9H0H5 632 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 MYOTQ9UBF9 498 aa12.99□□□□□ -0.33
C9orf3-202ENST00000297979 FAM183AA6NL82 134 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 RIIAD1A6NNX1 92 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 H3BUI4 141 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 CDC40O60508 579 aaKnown RBP eCLIP12.98□□□□□ -0.334e-7■■■■□ 25.7
C9orf3-202ENST00000297979 CSO75390 466 aaKnown RBP12.98□□□□□ -0.33
C9orf3-202ENST00000297979 STK17BO94768 372 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 APOL3O95236 402 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 TMED10P49755 219 aaKnown RBP12.98□□□□□ -0.33
C9orf3-202ENST00000297979 TOMM34Q15785 309 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-202ENST00000297979 BTBD16Q32M84 506 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 NIPAL3Q6P499 406 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 RAB11FIP2Q7L804 512 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 ZPBPQ9BS86 351 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 GPR179Q6PRD1 2367 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 IGHV1-45A0A0A0MS14 117 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 SOCS6O14544 535 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 ADAM10O14672 748 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 PEPDP12955 493 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 GP1BBP13224 206 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 HK1P19367 917 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 NOS3P29474 1203 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 RGS6P49758 472 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 LSM3P62310 102 aaKnown RBP12.98□□□□□ -0.33
C9orf3-202ENST00000297979 SPHARQ15513 63 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 ISXQ2M1V0 245 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 CDC6Q99741 560 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 DEFB126Q9BYW3 111 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 ZNF700Q9H0M5 742 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 IL32P24001 234 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 FOLR3P41439 243 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 RPS4XP62701 263 aaKnown RBP12.98□□□□□ -0.33
C9orf3-202ENST00000297979 EGR4Q05215 589 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 C1DQ13901 141 aaKnown RBP12.98□□□□□ -0.33
C9orf3-202ENST00000297979 SSPNQ14714 243 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 ZNF74Q16587 644 aa12.98□□□□□ -0.33
C9orf3-202ENST00000297979 CDONQ4KMG0 1287 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms