RNA–Protein interactions for RNA: ENST00000297261.6

SHH-201, Transcript of sonic hedgehog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHH, Length 4,454 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-201ENST00000297261 CSTBP04080 98 aaKnown RBP14.27□□□□□ -0.13
SHH-201ENST00000297261 TYRP1P17643 537 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 CRMP1Q14194 572 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 PRRT3Q5FWE3 981 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 SPIN3Q5JUX0 258 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 ZER1Q7Z7L7 766 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 PXT1Q8NFP0 134 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 STEAP2Q8NFT2 490 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 MYADMQ96S97 322 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 OBP2AQ9NY56 170 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 CHST2Q9Y4C5 530 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 RGS13O14921 159 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 LINC01565O15544 149 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 PRSS23O95084 383 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 AHSA1O95433 338 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 CAMLGP49069 296 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 RBMS2Q15434 407 aaKnown RBP14.27□□□□□ -0.13
SHH-201ENST00000297261 AANATQ16613 207 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 ZNF765Q7L2R6 523 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 OR2T4Q8NH00 348 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 ORAI3Q9BRQ5 295 aa14.27□□□□□ -0.13
SHH-201ENST00000297261 FBXO24O75426 580 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 TPT1P13693 172 aaKnown RBP14.26□□□□□ -0.13
SHH-201ENST00000297261 FUT1P19526 365 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 LUMP51884 338 aaPredicted RBP14.26□□□□□ -0.13
SHH-201ENST00000297261 METAP1P53582 386 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 PER3P56645 1201 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 LTBQ06643 244 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 MAPK14Q16539 360 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 TCTN3Q6NUS6 607 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 DNM1P34Q6PK57 102 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 LYPD8Q6UX82 237 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 UNQ6126/PRO20091Q6UXV3 157 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 SLC38A6Q8IZM9 456 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 ZFP82Q8N141 532 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 OR7D2Q96RA2 312 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 TMEM150CB9EJG8 249 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 ATP1B1P05026 303 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 CPEP16870 476 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 AMY2BP19961 511 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 RAB28P51157 221 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 CCR9P51686 369 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 TNFRSF17Q02223 184 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 HEPHL1Q6MZM0 1159 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 ZNF322Q6U7Q0 402 aaPredicted RBP14.26□□□□□ -0.13
SHH-201ENST00000297261 LIX1LQ8IVB5 337 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 RELL2Q8NC24 303 aaPredicted RBP14.26□□□□□ -0.13
SHH-201ENST00000297261 SMAP2Q8WU79 429 aaPredicted RBP14.26□□□□□ -0.13
SHH-201ENST00000297261 GPR174Q9BXC1 333 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 SLC6A17Q9H1V8 727 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 C8orf33Q9H7E9 229 aaPredicted RBP14.26□□□□□ -0.13
SHH-201ENST00000297261 CD207Q9UJ71 328 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 CAMK2AQ9UQM7 478 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 YBX2Q9Y2T7 364 aaKnown RBP14.26□□□□□ -0.13
SHH-201ENST00000297261 NPIPA5E9PKD4 350 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 KNG1P01042 644 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 CBR1P16152 277 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 RAB6AP20340 208 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 PEA15Q15121 130 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 SLC51BQ86UW2 128 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 MMP21Q8N119 569 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 OR6M1Q8NGM8 313 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 C2CD4CQ8TF44 421 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 SCARB1Q8WTV0 552 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 SLC38A3Q99624 504 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 APOOQ9BUR5 198 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 ZNF768Q9H5H4 540 aaKnown RBP14.26□□□□□ -0.13
SHH-201ENST00000297261 PARPBPQ9NWS1 579 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 NPIPA1Q9UND3 350 aa14.26□□□□□ -0.13
SHH-201ENST00000297261 A0A0A6YYH2 397 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 A6NJ64 397 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 SLCO2B1O94956 709 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 ZNF385BQ569K4 471 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 FAM27D1Q5T7N8 215 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 NLRC3Q7RTR2 1065 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 PRICKLE2Q7Z3G6 844 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 GLB1L2Q8IW92 636 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 PLA2G15Q8NCC3 412 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 OR5T2Q8NGG2 359 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 FAM46BQ96A09 425 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 OR8G3PP0DMU2 310 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 UBE2MP61081 183 aaKnown RBP14.25□□□□□ -0.13
SHH-201ENST00000297261 C1orf61Q13536 156 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 GXYLT1Q4G148 440 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 TMEM31Q5JXX7 168 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 PDCD1LG2Q9BQ51 273 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 SPNS1Q9H2V7 528 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 FN3KQ9H479 309 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 MVB12BQ9H7P6 319 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 SIDT1Q9NXL6 827 aaKnown RBP14.25□□□□□ -0.13
SHH-201ENST00000297261 TRAPPC4Q9Y296 219 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 A0A087WUU8 490 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 ZC3H12DA2A288 527 aaKnown RBP14.25□□□□□ -0.13
SHH-201ENST00000297261 RGS11O94810 467 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 EGFP01133 1207 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 ERCC1P07992 297 aaPredicted RBP14.25□□□□□ -0.13
SHH-201ENST00000297261 RAB40ALP0C0E4 278 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 OR8U9P0C7N5 309 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 DRD1P21728 446 aa14.25□□□□□ -0.13
SHH-201ENST00000297261 OR10A3P58181 314 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms