RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 OR6V1Q8N148 313 aa10.05□□□□□ -0.8
PKNOX1-201ENST00000291547 OR4F15Q8NGB8 312 aa10.05□□□□□ -0.8
PKNOX1-201ENST00000291547 OR9A4Q8NGU2 314 aa10.05□□□□□ -0.8
PKNOX1-201ENST00000291547 DUS3LQ96G46 650 aaKnown RBP10.05□□□□□ -0.8
PKNOX1-201ENST00000291547 PRRC1Q96M27 445 aa10.05□□□□□ -0.8
PKNOX1-201ENST00000291547 ZNF75AQ96N20 296 aa10.05□□□□□ -0.8
PKNOX1-201ENST00000291547 SORT1Q99523 831 aa10.05□□□□□ -0.8
PKNOX1-201ENST00000291547 C1QTNF2Q9BXJ5 285 aa10.05□□□□□ -0.8
PKNOX1-201ENST00000291547 D6RAR5 112 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 IMPA2O14732 288 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 F3P13726 295 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 HOXA9P31269 272 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 HTRA4P83105 476 aaPredicted RBP10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 SRYQ05066 204 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 ZNF542PQ5EBM4 170 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 GPRIN1Q7Z2K8 1008 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 IL22RA1Q8N6P7 574 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 MSI2Q96DH6 328 aaKnown RBP10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 TXN2Q99757 166 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 ADAM19Q9H013 955 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 GORASP2Q9H8Y8 452 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 RBFOX1Q9NWB1 397 aaKnown RBP10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 PPP1R14DQ9NXH3 145 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 RNASET2O00584 256 aaKnown RBP10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 OR2T1O43869 369 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 RNGTTO60942 597 aaKnown RBP10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 KCNK2O95069 426 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 ZNF44P15621 663 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 RBMS1P29558 406 aaKnown RBP10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 CAMK2DQ13557 499 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 RBMS2Q15434 407 aaKnown RBP10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 PIP5KL1Q5T9C9 394 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 RANBP10Q6VN20 620 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 OR9A2Q8NGT5 310 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 OR14L1PQ8NHC6 308 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 ADAMTS18Q8TE60 1221 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 MIB2Q96AX9 1013 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 C10orf90Q96M02 699 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 CUTCQ9NTM9 273 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 SAGE1Q9NXZ1 904 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 BRWD1Q9NSI6 2320 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 C2orf72A6NCS6 295 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 CCDC85CA6NKD9 419 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 B4DXG7 233 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 FAM227AF5H4B4 570 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 GABRPO00591 440 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 GATCO43716 136 aaKnown RBP10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 DUX1O43812 170 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 SDC3O75056 442 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 FZD7O75084 574 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 KLF8O95600 359 aaPredicted RBP10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 SOD2P04179 222 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 EFNA3P52797 238 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 MELKQ14680 651 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 RNF151Q2KHN1 245 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 PAN3Q58A45 887 aaKnown RBP10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 SFRP5Q5T4F7 317 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 HEPHL1Q6MZM0 1159 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 TMEM200AQ86VY9 491 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 TPRA1Q86W33 373 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 BAGE3Q86Y29 109 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 BAGE2Q86Y30 109 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 NANOS1Q8WY41 292 aaKnown RBP10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 CHRDQ9H2X0 955 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 SLAMF7Q9NQ25 335 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 NIT2Q9NQR4 276 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 DNAJB11Q9UBS4 358 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 GPR34Q9UPC5 381 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 DLEC1Q9Y238 1755 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 NPIPA5A0A0B4J1W7 369 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 NPIPA7E9PJI5 369 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 ADAM10O14672 748 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 NCR1O76036 304 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 NPIPA8P0DM63 369 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 TNK1Q13470 666 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 EBPQ15125 230 aaKnown RBP10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 HMGN3Q15651 99 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 BAK1Q16611 211 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 RAB6CQ53S08 254 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 C6orf132Q5T0Z8 1188 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 ENTHD1Q8IYW4 607 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 OR6T1Q8NGN1 323 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 TMEM163Q8TC26 289 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 SHDQ96IW2 340 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 HERPUD2Q9BSE4 406 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 OR11A1Q9GZK7 315 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 RAB6CQ9H0N0 254 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 RAB9BQ9NP90 201 aa10.04□□□□□ -0.8
PKNOX1-201ENST00000291547 MBLAC1A4D2B0 266 aaPredicted RBP10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 ARNTLO00327 626 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 ETV6P41212 452 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 DAP3P51398 398 aaKnown RBP10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 MSMO1Q15800 293 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 DEFB110Q30KQ9 67 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 PGGHGQ32M88 737 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 CNKSR3Q6P9H4 555 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 FAM199XQ6PEV8 388 aaPredicted RBP10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 MEPCEQ7L2J0 689 aaKnown RBP10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 PDZD3Q86UT5 571 aa10.03□□□□□ -0.8
PKNOX1-201ENST00000291547 ZNF610Q8N9Z0 462 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms