RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 UBL4AP11441 157 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 CHN2P52757 468 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 MYBPHQ13203 477 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 MFAP5Q13361 173 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 RBM39Q14498 530 aaKnown RBP7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 IQCCQ4KMZ1 466 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 ACER2Q5QJU3 275 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 SWT1Q5T5J6 900 aaKnown RBP7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 CXXC5Q7LFL8 322 aaKnown RBP7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 C8orf59Q8N0T1 100 aaPredicted RBP7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 GALNT16Q8N428 558 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 LINC00471Q8N535 108 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 NMD3Q96D46 503 aaKnown RBP7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 C9orf16Q9BUW7 83 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 ANGPTL4Q9BY76 406 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 DYNLRB1Q9NP97 96 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 FBXO34Q9NWN3 711 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 PARPBPQ9NWS1 579 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 PCDHGA9Q9Y5G4 932 aaKnown RBP7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 CHCHD2Q9Y6H1 151 aaPredicted RBP7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 ENPP4Q9Y6X5 453 aa7.7□□□□□ -1.18
PTPDC1-201ENST00000288976 A0A1W2PPL8 197 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 ETV2O00321 342 aaPredicted RBP7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 RENP00797 406 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 IGF2P01344 180 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 PGAM2P15259 253 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 SOX3P41225 446 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 RPS3AP61247 264 aaKnown RBP7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 SLC34A1Q06495 639 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 SKP2Q13309 424 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 TGIF1Q15583 401 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 SPANXN2Q5MJ10 180 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 MRPL2Q5T653 305 aaKnown RBP7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 AGAP7PQ5VUJ5 663 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 SHQ1Q6PI26 577 aaKnown RBP7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 ZAR1Q86SH2 424 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 ZDHHC21Q8IVQ6 265 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 PQLC1Q8N2U9 271 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 LSMEM1Q8N8F7 131 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 PIK3C3Q8NEB9 887 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 CENPNQ96H22 339 aaPredicted RBP7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 AGAP4Q96P64 663 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF300Q96RE9 604 aaPredicted RBP7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 PIP5K1AQ99755 562 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 HINT2Q9BX68 163 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 TRGV8A0A0C4DH27 118 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 UGT2B11O75310 529 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 CLPTM1O96005 669 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 MYL9P24844 172 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 PRKXP51817 358 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 MXD1Q05195 221 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 NPTX1Q15818 432 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF613Q6PF04 617 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 CARM1Q86X55 608 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 CLVS1Q8IUQ0 354 aaPredicted RBP7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 FAM86B1Q8N7N1 296 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 AMBRA1Q9C0C7 1298 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 VPS13AQ96RL7 3174 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 HTR3EA5X5Y0 456 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 ADAM10O14672 748 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 CELA2AP08217 269 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 NR4A1P22736 598 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 GDF1P27539 372 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 PTGDSP41222 190 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 TMPRSS3P57727 454 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 DUSP7Q16829 419 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 PACRGLQ8N7B6 248 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 CRELD1Q96HD1 420 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 NARS2Q96I59 477 aaKnown RBP7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 B3GAT2Q9NPZ5 323 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF71Q9NQZ8 489 aaPredicted RBP7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 NDUFAF4Q9P032 175 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 ADAM30Q9UKF2 790 aa7.69□□□□□ -1.18
PTPDC1-201ENST00000288976 ANKUB1A6NFN9 424 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 LIMS1P48059 325 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 HMGA2P52926 109 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 RAB25P57735 213 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 PMS2P3Q13401 168 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 KHDC1LQ5JSQ8 128 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 EEF1A1P5Q5VTE0 462 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 VTCN1Q7Z7D3 282 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 SPACA3Q8IXA5 215 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF808Q8N4W9 903 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 C3orf49Q96BT1 292 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 BORCS8Q96FH0 119 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 ADOQ96SZ5 270 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 OSBPL11Q9BXB4 747 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 TIGARQ9NQ88 270 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 SACM1LQ9NTJ5 587 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 SPIN1Q9Y657 262 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 FRYLO94915 3013 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 CCDC88CQ9P219 2028 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 A0A087WZY1 265 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 H0YJX3 145 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 ZNF264O43296 627 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 HPRP00739 348 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 ITGB2P05107 769 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 C17orf67Q0P5P2 114 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 TUBA3CQ13748 450 aa7.68□□□□□ -1.18
PTPDC1-201ENST00000288976 PTGES3Q15185 160 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms