RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 ELOA3Q8NG57 546 aa17.73■□□□□ 0.43
TIMP4-201ENST00000287814 ADAMTS16Q8TE57 1224 aa17.73■□□□□ 0.43
TIMP4-201ENST00000287814 KTI12Q96EK9 354 aaPredicted RBP17.73■□□□□ 0.43
TIMP4-201ENST00000287814 SLC47A1Q96FL8 570 aa17.73■□□□□ 0.43
TIMP4-201ENST00000287814 TAS2R1Q9NYW7 299 aa17.73■□□□□ 0.43
TIMP4-201ENST00000287814 SLC9A8Q9Y2E8 581 aa17.73■□□□□ 0.43
TIMP4-201ENST00000287814 A0A087WUJ7 227 aa17.72■□□□□ 0.43
TIMP4-201ENST00000287814 RAMP1O60894 148 aa17.72■□□□□ 0.43
TIMP4-201ENST00000287814 SS18L1O75177 396 aaPredicted RBP17.72■□□□□ 0.43
TIMP4-201ENST00000287814 ZNF682O95780 498 aa17.72■□□□□ 0.43
TIMP4-201ENST00000287814 PTNP21246 168 aa17.72■□□□□ 0.43
TIMP4-201ENST00000287814 H3F3AP84243 136 aa17.72■□□□□ 0.43
TIMP4-201ENST00000287814 C1orf140Q5VVS0 124 aa17.72■□□□□ 0.43
TIMP4-201ENST00000287814 ZNF613Q6PF04 617 aa17.72■□□□□ 0.43
TIMP4-201ENST00000287814 WDR88Q6ZMY6 472 aa17.72■□□□□ 0.43
TIMP4-201ENST00000287814 FAM214BQ7L5A3 538 aa17.72■□□□□ 0.43
TIMP4-201ENST00000287814 CCDC103Q8IW40 242 aa17.72■□□□□ 0.43
TIMP4-201ENST00000287814 RNF217Q8TC41 542 aa17.72■□□□□ 0.43
TIMP4-201ENST00000287814 STK35Q8TDR2 534 aa17.72■□□□□ 0.43
TIMP4-201ENST00000287814 FAM162AQ96A26 154 aa17.72■□□□□ 0.43
TIMP4-201ENST00000287814 GMPPAQ96IJ6 420 aaPredicted RBP17.72■□□□□ 0.43
TIMP4-201ENST00000287814 PTDSS2Q9BVG9 487 aa17.72■□□□□ 0.43
TIMP4-201ENST00000287814 ADPRHL2Q9NX46 363 aa17.72■□□□□ 0.43
TIMP4-201ENST00000287814 LIPT2A6NK58 231 aa17.71■□□□□ 0.43
TIMP4-201ENST00000287814 EEF1E1-BLOC1S5C9J1V9 151 aa17.71■□□□□ 0.43
TIMP4-201ENST00000287814 EEF1E1O43324 174 aaKnown RBP17.71■□□□□ 0.43
TIMP4-201ENST00000287814 CYTIPO60759 359 aa17.71■□□□□ 0.43
TIMP4-201ENST00000287814 PRKD3O94806 890 aa17.71■□□□□ 0.43
TIMP4-201ENST00000287814 CGAP01215 116 aa17.71■□□□□ 0.43
TIMP4-201ENST00000287814 PNMTP11086 282 aa17.71■□□□□ 0.43
TIMP4-201ENST00000287814 IDUAP35475 653 aa17.71■□□□□ 0.43
TIMP4-201ENST00000287814 LINC00114Q6XXX2 140 aa17.71■□□□□ 0.43
TIMP4-201ENST00000287814 TUSC5Q8IXB3 177 aa17.71■□□□□ 0.43
TIMP4-201ENST00000287814 PSD2Q9BQI7 771 aa17.71■□□□□ 0.43
TIMP4-201ENST00000287814 SNX13Q9Y5W8 968 aa17.71■□□□□ 0.43
TIMP4-201ENST00000287814 PLGP00747 810 aaPredicted RBP17.71■□□□□ 0.42
TIMP4-201ENST00000287814 OR7A5Q15622 319 aa17.71■□□□□ 0.42
TIMP4-201ENST00000287814 DEF8Q6ZN54 512 aa17.71■□□□□ 0.42
TIMP4-201ENST00000287814 LUZP2Q86TE4 346 aa17.71■□□□□ 0.42
TIMP4-201ENST00000287814 SLC43A2Q8N370 569 aa17.71■□□□□ 0.42
TIMP4-201ENST00000287814 ZNF775Q96BV0 537 aaPredicted RBP17.71■□□□□ 0.42
TIMP4-201ENST00000287814 AMBRA1Q9C0C7 1298 aa17.71■□□□□ 0.42
TIMP4-201ENST00000287814 FTCDNL1E5RQL4 147 aa17.7■□□□□ 0.42
TIMP4-201ENST00000287814 FUT4P22083 530 aa17.7■□□□□ 0.42
TIMP4-201ENST00000287814 AGTR1P30556 359 aa17.7■□□□□ 0.42
TIMP4-201ENST00000287814 RPS5P46782 204 aaKnown RBP17.7■□□□□ 0.42
TIMP4-201ENST00000287814 SLC35A1P78382 337 aa17.7■□□□□ 0.42
TIMP4-201ENST00000287814 PIN1Q13526 163 aaPredicted RBP17.7■□□□□ 0.42
TIMP4-201ENST00000287814 RNPS1Q15287 305 aaKnown RBP17.7■□□□□ 0.42
TIMP4-201ENST00000287814 SWT1Q5T5J6 900 aaKnown RBP17.7■□□□□ 0.42
TIMP4-201ENST00000287814 GTF2IRD2BQ6EKJ0 949 aa17.7■□□□□ 0.42
TIMP4-201ENST00000287814 ABLIM2Q6H8Q1 611 aa17.7■□□□□ 0.42
TIMP4-201ENST00000287814 NUFIP2Q7Z417 695 aaKnown RBP17.7■□□□□ 0.42
TIMP4-201ENST00000287814 GTF2IRD2Q86UP8 949 aa17.7■□□□□ 0.42
TIMP4-201ENST00000287814 MCEMP1Q8IX19 187 aa17.7■□□□□ 0.42
TIMP4-201ENST00000287814 FAM86B1Q8N7N1 296 aa17.7■□□□□ 0.42
TIMP4-201ENST00000287814 LZICQ8WZA0 190 aa17.7■□□□□ 0.42
TIMP4-201ENST00000287814 TAAR8Q969N4 342 aa17.7■□□□□ 0.42
TIMP4-201ENST00000287814 HSH2DQ96JZ2 352 aa17.7■□□□□ 0.42
TIMP4-201ENST00000287814 ZNF300Q96RE9 604 aaPredicted RBP17.7■□□□□ 0.42
TIMP4-201ENST00000287814 OPN3Q9H1Y3 402 aaPredicted RBP17.7■□□□□ 0.42
TIMP4-201ENST00000287814 GORASP2Q9H8Y8 452 aa17.7■□□□□ 0.42
TIMP4-201ENST00000287814 GLRX2Q9NS18 164 aa17.7■□□□□ 0.42
TIMP4-201ENST00000287814 DCAF13Q9NV06 445 aaKnown RBP17.7■□□□□ 0.42
TIMP4-201ENST00000287814 SELENONQ9NZV5 590 aa17.7■□□□□ 0.42
TIMP4-201ENST00000287814 KLHL13Q9P2N7 655 aa17.7■□□□□ 0.42
TIMP4-201ENST00000287814 SLC7A7Q9UM01 511 aa17.7■□□□□ 0.42
TIMP4-201ENST00000287814 TRAPPC13A5PLN9 417 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 A8MXE2 369 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 DNPH1O43598 174 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 CHP2O43745 196 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 SMNDC1O75940 238 aaKnown RBP eCLIP17.69■□□□□ 0.42
TIMP4-201ENST00000287814 AKR7A3O95154 331 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 ASCL1P50553 236 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 CTBP2P56545 445 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 RASGEF1BQ0VAM2 473 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 FBXL19-AS1Q494R0 122 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 EEF1A1P5Q5VTE0 462 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 GDF7Q7Z4P5 450 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 TSEN54Q7Z6J9 526 aaKnown RBP17.69■□□□□ 0.42
TIMP4-201ENST00000287814 TMEM99Q8N816 258 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 ZNF610Q8N9Z0 462 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 ACBD4Q8NC06 268 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 PRSS27Q9BQR3 290 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 C1orf21Q9H246 121 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 PIGMQ9H3S5 423 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 BCO1Q9HAY6 547 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 CHST11Q9NPF2 352 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 MPDZO75970 2070 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 HCFC1P51610 2035 aa17.69■□□□□ 0.42
TIMP4-201ENST00000287814 ZNF716A6NP11 495 aa17.68■□□□□ 0.42
TIMP4-201ENST00000287814 ARPC2O15144 300 aa17.68■□□□□ 0.42
TIMP4-201ENST00000287814 AHSA1O95433 338 aa17.68■□□□□ 0.42
TIMP4-201ENST00000287814 GPIP06744 558 aa17.68■□□□□ 0.42
TIMP4-201ENST00000287814 YES1P07947 543 aa17.68■□□□□ 0.42
TIMP4-201ENST00000287814 YAP1P46937 504 aaKnown RBP17.68■□□□□ 0.42
TIMP4-201ENST00000287814 LTBQ06643 244 aa17.68■□□□□ 0.42
TIMP4-201ENST00000287814 SNTB1Q13884 538 aaKnown RBP17.68■□□□□ 0.42
TIMP4-201ENST00000287814 ZNF474Q6S9Z5 364 aaPredicted RBP17.68■□□□□ 0.42
TIMP4-201ENST00000287814 FKBP9P1Q75LS8 142 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms