RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 MMP25Q9NPA2 562 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 NANSQ9NR45 359 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 INPP5EQ9NRR6 644 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 BABAM2Q9NXR7 383 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 HIF3AQ9Y2N7 669 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 YARS2Q9Y2Z4 477 aaKnown RBP8.73□□□□□ -1.01
TRIM55-201ENST00000276573 ADAM18Q9Y3Q7 739 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 TECTAO75443 2155 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 LAMA1P25391 3075 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 A0A075B6Q4 140 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 TMEM200CA6NKL6 621 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 LRRTM2O43300 516 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 SCO2O43819 266 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 AKAP8O43823 692 aaKnown RBP8.73□□□□□ -1.01
TRIM55-201ENST00000276573 GMFGO60234 142 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 GDF9O60383 454 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 ZNF354AO60765 605 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-201ENST00000276573 CPNE3O75131 537 aaKnown RBP8.73□□□□□ -1.01
TRIM55-201ENST00000276573 LDOC1O95751 146 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-201ENST00000276573 NUDT14O95848 222 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 GYPBP06028 91 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 CYC1P08574 325 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 ASAH2BP0C7U1 165 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 SP9P0CG40 484 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 ZNF12P17014 697 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 ZNF28P17035 718 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 CELP19835 753 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 GABRA5P31644 462 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 AQP2P41181 271 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 P2RX1P51575 399 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 PPP5CP53041 499 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 ERVK-25P63136 954 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 MC2RQ01718 297 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 POU4F2Q12837 409 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 CBFBQ13951 182 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 ZNF528Q3MIS6 628 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 TUBA3EQ6PEY2 450 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 CD200R1LQ6Q8B3 271 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 DBX2Q6ZNG2 339 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 KLBQ86Z14 1044 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 SDR9C7Q8NEX9 313 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 OR8K3Q8NH51 312 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 GPR119Q8TDV5 335 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 THAP3Q8WTV1 239 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-201ENST00000276573 SMPDL3BQ92485 455 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 TAAR8Q969N4 342 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 KTI12Q96EK9 354 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-201ENST00000276573 TM9SF2Q99805 663 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 ALG8Q9BVK2 526 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 NUAK2Q9H093 628 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 ADGRL4Q9HBW9 690 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 TOR4AQ9NXH8 423 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 QPCTLQ9NXS2 382 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 SLC6A5Q9Y345 797 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 PEX16Q9Y5Y5 336 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 TRDV1A0A1B0GX56 115 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 TAF4O00268 1085 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 CDC40O60508 579 aaKnown RBP eCLIP8.72□□□□□ -1.01
TRIM55-201ENST00000276573 CDRT1O95170 752 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 IL1AP01583 271 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 MRPL3P09001 348 aaKnown RBP8.72□□□□□ -1.01
TRIM55-201ENST00000276573 CCL4P13236 92 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 NAGAP17050 411 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 FGF9P31371 208 aaPredicted RBP8.72□□□□□ -1.01
TRIM55-201ENST00000276573 S100A5P33763 92 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 RORCP51449 518 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 SLC26A5P58743 744 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 FABP5Q01469 135 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 BDH1Q02338 343 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 GPR50Q13585 617 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 C22orf42Q6IC83 251 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 MISPQ8IVT2 679 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 OR10H4Q8NGA5 316 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 OR5L2Q8NGL0 311 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 B4GALNT2Q8NHY0 566 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 C8orf44Q96CB5 159 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 TBX5Q99593 518 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 KCNS3Q9BQ31 491 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 KATNB1Q9BVA0 655 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 BARHL1Q9BZE3 327 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 NMNAT2Q9BZQ4 307 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 RXFP3Q9NSD7 469 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 SNTG1Q9NSN8 517 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 ASB6Q9NWX5 421 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 C19orf25Q9UFG5 118 aaPredicted RBP8.72□□□□□ -1.01
TRIM55-201ENST00000276573 GSTK1Q9Y2Q3 226 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 TRAV36DV7A0A075B6V5 113 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 TMED7-TICAM2A0A0A6YYA0 188 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 TRBV11-1A0A0K0K1C0 115 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 OR6C68A6NDL8 312 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 CTDSP2O14595 271 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 IMPA2O14732 288 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 SULT1C4O75897 302 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 ZFAND5O76080 213 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 BGLAPP02818 100 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 HIST1H2ABP04908 130 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 KLK3P07288 261 aaPredicted RBP8.72□□□□□ -1.01
TRIM55-201ENST00000276573 CD14P08571 375 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 ZNF883P0CG24 379 aa8.72□□□□□ -1.01
TRIM55-201ENST00000276573 APEHP13798 732 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms