RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 S1PR1P21453 382 aa13.48□□□□□ -0.25
CNOT9-201ENST00000273064 PRKAR1BP31321 381 aa13.48□□□□□ -0.25
CNOT9-201ENST00000273064 MAGEA8P43361 318 aa13.48□□□□□ -0.25
CNOT9-201ENST00000273064 TNFRSF4P43489 277 aa13.48□□□□□ -0.25
CNOT9-201ENST00000273064 E2F1Q01094 437 aa13.48□□□□□ -0.25
CNOT9-201ENST00000273064 C3orf38Q5JPI3 329 aa13.48□□□□□ -0.25
CNOT9-201ENST00000273064 ATAD3CQ5T2N8 411 aa13.48□□□□□ -0.25
CNOT9-201ENST00000273064 VASNQ6EMK4 673 aa13.48□□□□□ -0.25
CNOT9-201ENST00000273064 LRRN1Q6UXK5 716 aa13.48□□□□□ -0.25
CNOT9-201ENST00000273064 MARCH3Q86UD3 253 aa13.48□□□□□ -0.25
CNOT9-201ENST00000273064 BMFQ96LC9 184 aa13.48□□□□□ -0.25
CNOT9-201ENST00000273064 NOP16Q9Y3C1 178 aaKnown RBP13.48□□□□□ -0.25
CNOT9-201ENST00000273064 AKAP6Q13023 2319 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 FAM221BA6H8Z2 402 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 GMFBP60983 142 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 SNRPGP62308 76 aaKnown RBP13.47□□□□□ -0.25
CNOT9-201ENST00000273064 AGAP7PQ5VUJ5 663 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 METAP1DQ6UB28 335 aaPredicted RBP13.47□□□□□ -0.25
CNOT9-201ENST00000273064 OR4M1Q8NGD0 313 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 CDCA4Q9BXL8 241 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 PITHD1Q9GZP4 211 aaPredicted RBP13.47□□□□□ -0.25
CNOT9-201ENST00000273064 CUTCQ9NTM9 273 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 PLCXD1Q9NUJ7 323 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 KLHL9Q9P2J3 617 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 TSPAN4O14817 238 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 DSCR3O14972 297 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 FPR3P25089 353 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 EMDP50402 254 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 SGCBQ16585 318 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 ZNF566Q969W8 418 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 ALG12Q9BV10 488 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 FGF21Q9NSA1 209 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 MGAT4CQ9UBM8 478 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 MGAT4AQ9UM21 535 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 SESN1Q9Y6P5 492 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 SPTBN1Q01082 2364 aaKnown RBP13.47□□□□□ -0.25
CNOT9-201ENST00000273064 KCNK2O95069 426 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 H2BFMP0C1H6 154 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 GABRG2P18507 467 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 ITGA3P26006 1051 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 MVDP53602 400 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 SPOCK1Q08629 439 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 YOD1Q5VVQ6 348 aaPredicted RBP13.47□□□□□ -0.25
CNOT9-201ENST00000273064 RPL13AP3Q6NVV1 102 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 TSSK4Q6SA08 328 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 PLXDC1Q8IUK5 500 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 LINC00346Q8IVM7 164 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 BOLLQ8N9W6 283 aaKnown RBP13.47□□□□□ -0.25
CNOT9-201ENST00000273064 DEDD2Q8WXF8 326 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 NOX4Q9NPH5 578 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 ACOXLQ9NUZ1 547 aa13.47□□□□□ -0.25
CNOT9-201ENST00000273064 OR5K3A6NET4 321 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 NOTOA8MTQ0 251 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 SLC19A2O60779 497 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 FZD7O75084 574 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 PGCP20142 388 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 NDUFA5Q16718 116 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 SLC6A19Q695T7 634 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 FAAP20Q6NZ36 180 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 ZAR1Q86SH2 424 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 ZNF227Q86WZ6 799 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 POGLUT1Q8NBL1 392 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 OR5M1Q8NGP8 315 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 C16orf52Q8NHV5 167 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 SLC6A7Q99884 636 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 CRB3Q9BUF7 120 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 OR11A1Q9GZK7 315 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 ANKRD10Q9NXR5 420 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 SLC17A4Q9Y2C5 497 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 HRKO00198 91 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 ARPC1BO15143 372 aaKnown RBP13.46□□□□□ -0.25
CNOT9-201ENST00000273064 SPINT1O43278 529 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 KLK3P07288 261 aaPredicted RBP13.46□□□□□ -0.25
CNOT9-201ENST00000273064 CT62P0C5K7 136 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 ZNF41P51814 821 aaPredicted RBP13.46□□□□□ -0.25
CNOT9-201ENST00000273064 PCBP3P57721 371 aaKnown RBP13.46□□□□□ -0.25
CNOT9-201ENST00000273064 KIAA0895LQ68EN5 471 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 THSD4Q6ZMP0 1018 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 SLITRK4Q8IW52 837 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 SIRT6Q8N6T7 355 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 LGALS14Q8TCE9 139 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 CDCA3Q99618 268 aaPredicted RBP13.46□□□□□ -0.25
CNOT9-201ENST00000273064 LPAR4Q99677 370 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 EMC6Q9BV81 110 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 UBQLN4Q9NRR5 601 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 PPP4R1LQ9P1A2 415 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 C19orf53Q9UNZ5 99 aaPredicted RBP13.46□□□□□ -0.25
CNOT9-201ENST00000273064 SLC22A7Q9Y694 548 aa13.46□□□□□ -0.25
CNOT9-201ENST00000273064 A0A1W2PPV9 198 aa13.46□□□□□ -0.26
CNOT9-201ENST00000273064 SERINC4A6NH21 518 aa13.46□□□□□ -0.26
CNOT9-201ENST00000273064 L7N2F9 121 aa13.46□□□□□ -0.26
CNOT9-201ENST00000273064 PCBP4P57723 403 aaKnown RBP13.46□□□□□ -0.26
CNOT9-201ENST00000273064 MRPS21P82921 87 aaKnown RBP13.46□□□□□ -0.26
CNOT9-201ENST00000273064 RTL10Q7L3V2 364 aa13.46□□□□□ -0.26
CNOT9-201ENST00000273064 ZNF283Q8N7M2 679 aa13.46□□□□□ -0.26
CNOT9-201ENST00000273064 GOT1L1Q8NHS2 421 aaPredicted RBP13.46□□□□□ -0.26
CNOT9-201ENST00000273064 DNAJA4Q8WW22 397 aaPredicted RBP13.46□□□□□ -0.26
CNOT9-201ENST00000273064 NXPE2Q96DL1 559 aa13.46□□□□□ -0.26
CNOT9-201ENST00000273064 FAM71F1Q96KD3 344 aaPredicted RBP13.46□□□□□ -0.26
CNOT9-201ENST00000273064 PLSCR3Q9NRY6 295 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms