RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 CHMP1BQ7LBR1 199 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 KIF18BQ86Y91 864 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 RAB43Q86YS6 212 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.51□□□□□ -1.05
SSR3-201ENST00000265044 ESX1Q8N693 406 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 POGLUT1Q8NBL1 392 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 BBS1Q8NFJ9 593 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 FOXN4Q96NZ1 517 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 KCNS3Q9BQ31 491 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 PRRG4Q9BZD6 226 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.51□□□□□ -1.05
SSR3-201ENST00000265044 FN3KQ9H479 309 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 ALKBH4Q9NXW9 302 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 OSGIN1Q9UJX0 560 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 OIP5O43482 229 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 TRIM3O75382 744 aaPredicted RBP8.51□□□□□ -1.05
SSR3-201ENST00000265044 GP1BAP07359 652 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 PRKAR1AP10644 381 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 LIMS1P48059 325 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 WNT4P56705 351 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 GPR85P60893 370 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 MC2RQ01718 297 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 WDR88Q6ZMY6 472 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 LINC00696Q6ZRV3 163 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 MEPCEQ7L2J0 689 aaKnown RBP8.51□□□□□ -1.05
SSR3-201ENST00000265044 MISPQ8IVT2 679 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 CLEC1AQ8NC01 280 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 OR2Y1Q8NGV0 311 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 OR4Q3Q8NH05 313 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 APOBEC4Q8WW27 367 aaKnown RBP8.51□□□□□ -1.05
SSR3-201ENST00000265044 APH1BQ8WW43 257 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 ZNF566Q969W8 418 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 DDIT4LQ96D03 193 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 RASD2Q96D21 266 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 TRIM36Q9NQ86 728 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 STMN3Q9NZ72 180 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 CHST2Q9Y4C5 530 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 RTTNQ86VV8 2226 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 OR6C70A6NIJ9 312 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 ALG1L2C9J202 215 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 MRPS14O60783 128 aaKnown RBP8.51□□□□□ -1.05
SSR3-201ENST00000265044 OR7A10O76100 309 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 IGHEP01854 428 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 ACVR1BP36896 505 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 ACAA2P42765 397 aaKnown RBP8.51□□□□□ -1.05
SSR3-201ENST00000265044 RGS6P49758 472 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 TAF13Q15543 124 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 CLPPQ16740 277 aaPredicted RBP8.51□□□□□ -1.05
SSR3-201ENST00000265044 ODF4Q2M2E3 257 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 GLYR1Q49A26 553 aaPredicted RBP8.51□□□□□ -1.05
SSR3-201ENST00000265044 KLHL26Q53HC5 615 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 NXNL2Q5VZ03 156 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 SLC22A10Q63ZE4 541 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 APOOLQ6UXV4 268 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 THSD4Q6ZMP0 1018 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 USP43Q70EL4 1123 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 GRINAQ7Z429 371 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 COMMD2Q86X83 199 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 LSM14AQ8ND56 463 aaKnown RBP8.51□□□□□ -1.05
SSR3-201ENST00000265044 OR14L1PQ8NHC6 308 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 SPSB2Q99619 263 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 HDHD5Q9BXW7 423 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 FBXO8Q9NRD0 319 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 PLCXD1Q9NUJ7 323 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 ZNF229Q9UJW7 825 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 CDV3Q9UKY7 258 aaKnown RBP8.51□□□□□ -1.05
SSR3-201ENST00000265044 PPIEQ9UNP9 301 aaKnown RBP8.51□□□□□ -1.05
SSR3-201ENST00000265044 SIGLEC7Q9Y286 467 aa8.51□□□□□ -1.05
SSR3-201ENST00000265044 SPAARA0A1B0GVQ0 90 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 TVP23AA6NH52 213 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 C17orf51A8MQB3 221 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 SHISA8B8ZZ34 492 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 SEC14L2O76054 403 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 MT-ND5P03915 603 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 IGKV3-11P04433 115 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 LIPAP38571 399 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 EIF1AXP47813 144 aaKnown RBP8.5□□□□□ -1.05
SSR3-201ENST00000265044 GP2P55259 537 aaKnown RBP8.5□□□□□ -1.05
SSR3-201ENST00000265044 OCLNQ16625 522 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 TMEM176BQ3YBM2 270 aaPredicted RBP8.5□□□□□ -1.05
SSR3-201ENST00000265044 CARD17Q5XLA6 110 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 LCN10Q6JVE6 187 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 GRAMD2AQ8IUY3 354 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 OR52I1Q8NGK6 324 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 THOC3Q96J01 351 aaKnown RBP8.5□□□□□ -1.05
SSR3-201ENST00000265044 ZPBPQ9BS86 351 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 BRD7Q9NPI1 651 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 MEPEQ9NQ76 525 aaPredicted RBP8.5□□□□□ -1.05
SSR3-201ENST00000265044 CENPMQ9NSP4 180 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 ENPP5Q9UJA9 477 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 IGKV3D-11A0A0A0MRZ8 115 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 A8MVM7 634 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 MASP2O00187 686 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 KRT33AO76009 404 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 HIST1H1CP16403 213 aaKnown RBP8.5□□□□□ -1.05
SSR3-201ENST00000265044 HTR3AP46098 478 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 GBX2P52951 348 aaPredicted RBP8.5□□□□□ -1.05
SSR3-201ENST00000265044 CDK5Q00535 292 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 ZNF528Q3MIS6 628 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 FAM69AQ5T7M9 428 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms