RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 TRIM43Q96BQ3 446 aaPredicted RBP11.42□□□□□ -0.58
CHMP3-201ENST00000263856 CNN2Q99439 309 aaKnown RBP11.42□□□□□ -0.58
CHMP3-201ENST00000263856 FXYD6Q9H0Q3 95 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 LIN7BQ9HAP6 207 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 HRASLSQ9HDD0 168 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 TAS2R10Q9NYW0 307 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 SCML1Q9UN30 329 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 COPS3Q9UNS2 423 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 STON1Q9Y6Q2 735 aa11.42□□□□□ -0.58
CHMP3-201ENST00000263856 MEIKINA0A087WXM9 373 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 MCIDASD6RGH6 385 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 LGALS8O00214 317 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 KAT7O95251 611 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 MAS1P04201 325 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 NGFRP08138 427 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 FBXO45P0C2W1 286 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 POU3F2P20265 443 aaPredicted RBP11.41□□□□□ -0.58
CHMP3-201ENST00000263856 SLC6A6P31641 620 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 NUDT1P36639 197 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 PGDP52209 483 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 ERVK-25P63136 954 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 SIRPAP78324 504 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 KCNAB1Q14722 419 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 OPCMLQ14982 345 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 DMKNQ6E0U4 476 aaPredicted RBP11.41□□□□□ -0.58
CHMP3-201ENST00000263856 OR5M10Q6IEU7 315 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 TMEM65Q6PI78 240 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 POMZP3Q6PJE2 187 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 IDO2Q6ZQW0 420 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 MOSPD2Q8NHP6 518 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 SYNPRQ8TBG9 265 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 ZPLD1Q8TCW7 415 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 GAL3ST3Q96A11 431 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 ZNF764Q96H86 408 aaPredicted RBP11.41□□□□□ -0.58
CHMP3-201ENST00000263856 C10orf90Q96M02 699 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 TMEM138Q9NPI0 162 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 CNTRLQ7Z7A1 2325 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 A0A1B0GTH9 108 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 CTSVO60911 334 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 SERPINA3P01011 423 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 CCR9P51686 369 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 CDK5R1Q15078 307 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 PON3Q15166 354 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 GARNL3Q5VVW2 1013 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 SLC22A10Q63ZE4 541 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 GPR139Q6DWJ6 353 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 HEPHL1Q6MZM0 1159 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 ZNF511Q8NB15 262 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 PATE1Q8WXA2 126 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 SIPA1Q96FS4 1042 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 PAWRQ96IZ0 340 aaKnown RBP11.41□□□□□ -0.58
CHMP3-201ENST00000263856 SFXN2Q96NB2 322 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 SORCS2Q96PQ0 1159 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 TEX101Q9BY14 249 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 NOX3Q9HBY0 568 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 ST6GALNAC2Q9UJ37 374 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 IKZF2Q9UKS7 526 aa11.41□□□□□ -0.58
CHMP3-201ENST00000263856 LINC00862A6NCI5 91 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 H7C1C5 153 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 ADAM11O75078 769 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 AGR2O95994 175 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 SULT1A3P0DMM9 295 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 SULT1A4P0DMN0 295 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 OR8G3PP0DMU2 310 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 LCN6P62502 163 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 TRAM1Q15629 374 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 CDONQ4KMG0 1287 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 TTC9Q92623 222 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 RAB7BQ96AH8 199 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 SMIM19Q96E16 107 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 FOXN4Q96NZ1 517 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 MS4A7Q9GZW8 240 aaPredicted RBP11.4□□□□□ -0.58
CHMP3-201ENST00000263856 FLRT3Q9NZU0 649 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 COPZ2Q9P299 210 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 CAMK2AQ9UQM7 478 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 COLEC10Q9Y6Z7 277 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 EYSQ5T1H1 3165 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 A0A1B0GVI7 797 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 POM121BA6NF01 834 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 SHOXO15266 292 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 KRT33AO76009 404 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 PSMB1P20618 241 aaKnown RBP11.4□□□□□ -0.58
CHMP3-201ENST00000263856 VASPP50552 380 aaPredicted RBP11.4□□□□□ -0.58
CHMP3-201ENST00000263856 ACTC1P68032 377 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 ACTA1P68133 377 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 KLF9Q13886 244 aaPredicted RBP11.4□□□□□ -0.58
CHMP3-201ENST00000263856 LINC00303Q3SY05 128 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 YOD1Q5VVQ6 348 aaPredicted RBP11.4□□□□□ -0.58
CHMP3-201ENST00000263856 OR11G2Q8NGC1 345 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 OR8S1Q8NH09 359 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 ZNF350Q9GZX5 532 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 C12orf4Q9NQ89 552 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 ABRACLQ9P1F3 81 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 DAPP1Q9UN19 280 aa11.4□□□□□ -0.58
CHMP3-201ENST00000263856 OR6C74A6NCV1 312 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 RNGTTO60942 597 aaKnown RBP11.4□□□□□ -0.59
CHMP3-201ENST00000263856 TMIGD3P0DMS9 266 aaPredicted RBP11.4□□□□□ -0.59
CHMP3-201ENST00000263856 MYOGP15173 224 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 SRMP19623 302 aa11.4□□□□□ -0.59
CHMP3-201ENST00000263856 IGFALSP35858 605 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms