RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CLN3Q13286 438 aa20.72■□□□□ 0.91
SMARCB1-201ENST00000263121 SYT14P1Q58G82 188 aa20.72■□□□□ 0.91
SMARCB1-201ENST00000263121 C1QL3Q5VWW1 255 aa20.72■□□□□ 0.91
SMARCB1-201ENST00000263121 MEDAGQ5VYS4 303 aa20.72■□□□□ 0.91
SMARCB1-201ENST00000263121 SPARTQ8N0X7 666 aa20.72■□□□□ 0.91
SMARCB1-201ENST00000263121 C10orf53Q8N6V4 93 aa20.72■□□□□ 0.91
SMARCB1-201ENST00000263121 PSD4Q8NDX1 1056 aa20.72■□□□□ 0.91
SMARCB1-201ENST00000263121 GGHQ92820 318 aa20.72■□□□□ 0.91
SMARCB1-201ENST00000263121 AMBNQ9NP70 447 aa20.72■□□□□ 0.91
SMARCB1-201ENST00000263121 WDR70Q9NW82 654 aa20.72■□□□□ 0.91
SMARCB1-201ENST00000263121 ERVK-18Q9QC07 812 aa20.72■□□□□ 0.91
SMARCB1-201ENST00000263121 HIF3AQ9Y2N7 669 aa20.72■□□□□ 0.91
SMARCB1-201ENST00000263121 G3V3Y1 287 aa20.71■□□□□ 0.91
SMARCB1-201ENST00000263121 MRPS14O60783 128 aaKnown RBP20.71■□□□□ 0.91
SMARCB1-201ENST00000263121 TRIM3O75382 744 aaPredicted RBP20.71■□□□□ 0.91
SMARCB1-201ENST00000263121 TSPAN19P0C672 248 aa20.71■□□□□ 0.91
SMARCB1-201ENST00000263121 WT1P19544 449 aaPredicted RBP20.71■□□□□ 0.91
SMARCB1-201ENST00000263121 MLLT10P55197 1068 aa20.71■□□□□ 0.91
SMARCB1-201ENST00000263121 SOX8P57073 446 aa20.71■□□□□ 0.91
SMARCB1-201ENST00000263121 ANKDD1AQ495B1 522 aa20.71■□□□□ 0.91
SMARCB1-201ENST00000263121 C1orf140Q5VVS0 124 aa20.71■□□□□ 0.91
SMARCB1-201ENST00000263121 AHSA2Q719I0 299 aa20.71■□□□□ 0.91
SMARCB1-201ENST00000263121 BCDIN3DQ7Z5W3 292 aaKnown RBP20.71■□□□□ 0.91
SMARCB1-201ENST00000263121 LRR1Q96L50 414 aa20.71■□□□□ 0.91
SMARCB1-201ENST00000263121 ABI3Q9P2A4 366 aa20.71■□□□□ 0.91
SMARCB1-201ENST00000263121 GPR52Q9Y2T5 361 aa20.71■□□□□ 0.91
SMARCB1-201ENST00000263121 FREM2Q5SZK8 3169 aa20.71■□□□□ 0.91
SMARCB1-201ENST00000263121 A0A087WZY1 265 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 ARGFXA6NJG6 315 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 FAM47E-STBD1D6RA91 191 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 NKX2-8O15522 239 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 ZNF208O43345 1280 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 PPP1R3DO95685 299 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 MT-ATP6P00846 226 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 CD96P40200 585 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 SLC15A1P46059 708 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 MAP2K6P52564 334 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 RRADP55042 308 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 PRPS1P60891 318 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 FOXK2Q01167 660 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 NADK2Q4G0N4 442 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 TIGD3Q6B0B8 471 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 KCTD8Q6ZWB6 473 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 GALNT16Q8N428 558 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 OR1J4Q8NGS1 313 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 ZNF582Q96NG8 517 aaPredicted RBP20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 GPX7Q96SL4 187 aaPredicted RBP20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 OR11A1Q9GZK7 315 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 KLK13Q9UKR3 277 aa20.7■□□□□ 0.91
SMARCB1-201ENST00000263121 KDM4EB2RXH2 506 aaPredicted RBP20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 SHISA8B8ZZ34 492 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 MCIDASD6RGH6 385 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 RGS10O43665 173 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 SLC2A10O95528 541 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 SDHBP21912 280 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 UQCRC1P31930 480 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 MASP1P48740 699 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 OC90Q02509 493 aaPredicted RBP20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 TUBA3CQ13748 450 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 GXYLT1Q4G148 440 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 FAM69AQ5T7M9 428 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 TUBA3EQ6PEY2 450 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 SATL1Q86VE3 508 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 OR6S1Q8NH40 331 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 ZBTB8AQ96BR9 441 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 PLEKHA8Q96JA3 519 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 COPS4Q9BT78 406 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 CMC2Q9NRP2 79 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 GPR83Q9NYM4 423 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 CNOT2Q9NZN8 540 aaKnown RBP20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 LRFN1Q9P244 771 aa20.7■□□□□ 0.9
SMARCB1-201ENST00000263121 A0A0G2JMM0 328 aa20.69■□□□□ 0.9
SMARCB1-201ENST00000263121 A0A1W2PPB8 328 aa20.69■□□□□ 0.9
SMARCB1-201ENST00000263121 A0A1W2PRS3 328 aa20.69■□□□□ 0.9
SMARCB1-201ENST00000263121 KIR3DP1A8MWS1 328 aa20.69■□□□□ 0.9
SMARCB1-201ENST00000263121 EFNA2O43921 213 aa20.69■□□□□ 0.9
SMARCB1-201ENST00000263121 AHSA1O95433 338 aa20.69■□□□□ 0.9
SMARCB1-201ENST00000263121 PEPDP12955 493 aa20.69■□□□□ 0.9
SMARCB1-201ENST00000263121 ADH6P28332 368 aa20.69■□□□□ 0.9
SMARCB1-201ENST00000263121 CASRP41180 1078 aa20.69■□□□□ 0.9
SMARCB1-201ENST00000263121 DNASE1L1P49184 302 aa20.69■□□□□ 0.9
SMARCB1-201ENST00000263121 DPY19L2P2Q6ZN68 376 aa20.69■□□□□ 0.9
SMARCB1-201ENST00000263121 PRSS48Q7RTY5 328 aa20.69■□□□□ 0.9
SMARCB1-201ENST00000263121 LRRC75AQ8NAA5 344 aa20.69■□□□□ 0.9
SMARCB1-201ENST00000263121 MOSPD2Q8NHP6 518 aa20.69■□□□□ 0.9
SMARCB1-201ENST00000263121 FN3KQ9H479 309 aa20.69■□□□□ 0.9
SMARCB1-201ENST00000263121 PCDHGB1Q9Y5G3 927 aa20.69■□□□□ 0.9
SMARCB1-201ENST00000263121 SNX5Q9Y5X3 404 aa20.69■□□□□ 0.9
SMARCB1-201ENST00000263121 CDK2AP1O14519 115 aa20.68■□□□□ 0.9
SMARCB1-201ENST00000263121 NEURL1O76050 574 aa20.68■□□□□ 0.9
SMARCB1-201ENST00000263121 MT-ND2P03891 347 aa20.68■□□□□ 0.9
SMARCB1-201ENST00000263121 PRKAR1AP10644 381 aa20.68■□□□□ 0.9
SMARCB1-201ENST00000263121 PIPP12273 146 aaPredicted RBP20.68■□□□□ 0.9
SMARCB1-201ENST00000263121 JUNBP17275 347 aaPredicted RBP20.68■□□□□ 0.9
SMARCB1-201ENST00000263121 EIF1P41567 113 aaKnown RBP20.68■□□□□ 0.9
SMARCB1-201ENST00000263121 DSCR4P56555 118 aaPredicted RBP20.68■□□□□ 0.9
SMARCB1-201ENST00000263121 CRTC2Q53ET0 693 aaPredicted RBP20.68■□□□□ 0.9
SMARCB1-201ENST00000263121 AADACL4Q5VUY2 407 aa20.68■□□□□ 0.9
SMARCB1-201ENST00000263121 XAF1Q6GPH4 301 aa20.68■□□□□ 0.9
SMARCB1-201ENST00000263121 MYDGFQ969H8 173 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms