RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 PTDSS2Q9BVG9 487 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 SRXN1Q9BYN0 137 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 CALHM2Q9HA72 323 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 TIGARQ9NQ88 270 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 CLCF1Q9UBD9 225 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 SH3BGRL2Q9UJC5 107 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 TESMINQ9Y4I5 508 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 TRAV36DV7A0A075B6V5 113 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 CD8B2A6NJW9 211 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 LIPT2A6NK58 231 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 KDM4EB2RXH2 506 aaPredicted RBP14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 E9PLN8 166 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 OR2T1O43869 369 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 FKBP6O75344 327 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 AHSA1O95433 338 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 RRM2P31350 389 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 IDUAP35475 653 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 RPS5P46782 204 aaKnown RBP14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 PON3Q15166 354 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 FAM69AQ5T7M9 428 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 C1orf185Q5T7R7 199 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 RPTNQ6XPR3 784 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 B3GNT6Q6ZMB0 384 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 RPRMLQ8N4K4 120 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 ACOT11Q8WXI4 607 aaPredicted RBP14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 TAAR8Q969N4 342 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 CPNE4Q96A23 557 aaPredicted RBP14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 TRIB1Q96RU8 372 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 EPYCQ99645 322 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 VKORC1Q9BQB6 163 aa14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 MEPEQ9NQ76 525 aaPredicted RBP14.9□□□□□ -0.02
CHCHD3-201ENST00000262570 A0A087WUU8 490 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 FTCDNL1E5RQL4 147 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 DNPH1O43598 174 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 KRT36O76013 467 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 GADD45GO95257 159 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 FPR1P21462 350 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 HMGA2P52926 109 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 UGT2B15P54855 530 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 SMIM11AP58511 58 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 SPIBQ01892 262 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 OR2T5Q6IEZ7 315 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 PLXDC2Q6UX71 529 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 SEM1Q6ZVN7 128 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 OR2T29Q8NH02 315 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 OR6S1Q8NH40 331 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 OR52J3Q8NH60 311 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 MFSD8Q8NHS3 518 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 FNDC9Q8TBE3 224 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 TTYH2Q9BSA4 534 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 FUZQ9BT04 418 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 YY1AP1Q9H869 796 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 ARMC1Q9NVT9 282 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 MCTS1Q9ULC4 181 aaKnown RBP14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 MEMO1Q9Y316 297 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 ZNF175Q9Y473 711 aa14.89□□□□□ -0.03
CHCHD3-201ENST00000262570 TRBV4-1A0A0J9YWV2 114 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 FZD7O75084 574 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 TGM6O95932 706 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 CST1P01037 141 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 IGF2P01344 180 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 PLA2G2AP14555 144 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 AGFG1P52594 562 aaKnown RBP14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 SLC35A1P78382 337 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 LSM11P83369 360 aaKnown RBP eCLIP14.88□□□□□ -0.033e-10■■■■■ 44.4
CHCHD3-201ENST00000262570 H3F3AP84243 136 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 LTBQ06643 244 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 OR7A5Q15622 319 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 ZNF239Q16600 458 aaKnown RBP14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 PODNL1Q6PEZ8 512 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 TBPL2Q6SJ96 375 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 RNF113BQ8IZP6 322 aaKnown RBP14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 WNT2BQ93097 391 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 DMRTA2Q96SC8 542 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 TAPBPLQ9BX59 468 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 KLHL4Q9C0H6 718 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 MED31Q9Y3C7 131 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 AP4S1Q9Y587 144 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 LYVE1Q9Y5Y7 322 aa14.88□□□□□ -0.03
CHCHD3-201ENST00000262570 MBD3L4A6NDZ8 208 aaPredicted RBP14.87□□□□□ -0.03
CHCHD3-201ENST00000262570 MBD3L3A6NE82 208 aaPredicted RBP14.87□□□□□ -0.03
CHCHD3-201ENST00000262570 MBD3L5A6NJ08 208 aaPredicted RBP14.87□□□□□ -0.03
CHCHD3-201ENST00000262570 SLC22A20A6NK97 555 aa14.87□□□□□ -0.03
CHCHD3-201ENST00000262570 KPNA4O00629 521 aaPredicted RBP14.87□□□□□ -0.03
CHCHD3-201ENST00000262570 SYNGR4O95473 234 aa14.87□□□□□ -0.03
CHCHD3-201ENST00000262570 ENPP1P22413 925 aa14.87□□□□□ -0.03
CHCHD3-201ENST00000262570 LIMS1P48059 325 aa14.87□□□□□ -0.03
CHCHD3-201ENST00000262570 OR2B6P58173 313 aa14.87□□□□□ -0.03
CHCHD3-201ENST00000262570 FGD3Q5JSP0 725 aa14.87□□□□□ -0.03
CHCHD3-201ENST00000262570 ZNF730Q6ZMV8 503 aa14.87□□□□□ -0.03
CHCHD3-201ENST00000262570 MARVELD2Q8N4S9 558 aa14.87□□□□□ -0.03
CHCHD3-201ENST00000262570 PFN4Q8NHR9 129 aa14.87□□□□□ -0.03
CHCHD3-201ENST00000262570 MBD3L2Q8NHZ7 208 aaPredicted RBP14.87□□□□□ -0.03
CHCHD3-201ENST00000262570 SLC25A36Q96CQ1 311 aa14.87□□□□□ -0.03
CHCHD3-201ENST00000262570 C20orf141Q9NUB4 165 aa14.87□□□□□ -0.03
CHCHD3-201ENST00000262570 MPDZO75970 2070 aa14.87□□□□□ -0.03
CHCHD3-201ENST00000262570 A0A1B0GUH1 482 aa14.86□□□□□ -0.03
CHCHD3-201ENST00000262570 LRRN3E7EW58 273 aa14.86□□□□□ -0.03
CHCHD3-201ENST00000262570 PYCARD-AS1I3L0S3 204 aa14.86□□□□□ -0.03
CHCHD3-201ENST00000262570 CCL21O00585 134 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms