RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 RNF128Q8TEB7 428 aa16.77■□□□□ 0.28
CYSTM1-201ENST00000261811 GEMIN6Q8WXD5 167 aaKnown RBP16.77■□□□□ 0.28
CYSTM1-201ENST00000261811 ROBO4Q8WZ75 1007 aa16.77■□□□□ 0.28
CYSTM1-201ENST00000261811 MPP4Q96JB8 637 aa16.77■□□□□ 0.28
CYSTM1-201ENST00000261811 SRXN1Q9BYN0 137 aa16.77■□□□□ 0.28
CYSTM1-201ENST00000261811 MUC13Q9H3R2 512 aa16.77■□□□□ 0.28
CYSTM1-201ENST00000261811 FOXD3Q9UJU5 478 aaPredicted RBP16.77■□□□□ 0.28
CYSTM1-201ENST00000261811 PACSIN3Q9UKS6 424 aa16.77■□□□□ 0.28
CYSTM1-201ENST00000261811 SNX13Q9Y5W8 968 aa16.77■□□□□ 0.28
CYSTM1-201ENST00000261811 USP9YO00507 2555 aaPredicted RBP16.77■□□□□ 0.27
CYSTM1-201ENST00000261811 A0A087WUJ7 227 aa16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 A0A1W2PNV4 684 aa16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 TMEM229AB2RXF0 380 aa16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 GYG2O15488 501 aa16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 AQP8O94778 261 aa16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 ASCL1P50553 236 aa16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 AGFG1P52594 562 aaKnown RBP16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 CDH12P55289 794 aa16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 MFSD13AQ14CX5 517 aa16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 PLXDC2Q6UX71 529 aa16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 CYP4Z1Q86W10 505 aa16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 POP5Q969H6 163 aaKnown RBP16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 NSMCE2Q96MF7 247 aa16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 PRR14Q9BWN1 585 aa16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 FANCFQ9NPI8 374 aa16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 EMC3Q9P0I2 261 aa16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 GMPR2Q9P2T1 348 aaKnown RBP16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 PLEKHB1Q9UF11 243 aaPredicted RBP16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 FLNBO75369 2602 aaKnown RBP16.76■□□□□ 0.27
CYSTM1-201ENST00000261811 EEF1E1-BLOC1S5C9J1V9 151 aa16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 EEF1E1O43324 174 aaKnown RBP16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 TPST2O60704 377 aa16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 CYTIPO60759 359 aa16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 SS18L1O75177 396 aaPredicted RBP16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 THRBP10828 461 aa16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 FPR1P21462 350 aa16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 OR1E2P47887 323 aa16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 SIRPAP78324 504 aa16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 RASGEF1BQ0VAM2 473 aa16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 FOXF2Q12947 444 aa16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 CEACAM7Q14002 265 aa16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 FXNQ16595 210 aa16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 TTC33Q6PID6 262 aaPredicted RBP16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 STK32CQ86UX6 486 aa16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 FAM156AQ8NDB6 213 aa16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 OR6K3Q8NGY3 331 aa16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 MFSD8Q8NHS3 518 aa16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 TMEM43Q9BTV4 400 aa16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 DCAF13Q9NV06 445 aaKnown RBP16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 TAS2R1Q9NYW7 299 aa16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 C6orf203Q9P0P8 240 aaPredicted RBP16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 FAM32AQ9Y421 112 aaKnown RBP16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 SETXQ7Z333 2677 aaKnown RBP16.75■□□□□ 0.27
CYSTM1-201ENST00000261811 TRAV36DV7A0A075B6V5 113 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 ZC3H12DA2A288 527 aaKnown RBP16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 NKX2-6A6NCS4 301 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 GPR171O14626 319 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 SMNDC1O75940 238 aaKnown RBP eCLIP16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 OR5F1O95221 314 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 CLDN1O95832 211 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 YES1P07947 543 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 PEX19P40855 299 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 OR7A5Q15622 319 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 NPTX1Q15818 432 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 MTX3Q5HYI7 312 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 FAM69AQ5T7M9 428 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 PAQR6Q6TCH4 344 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 RBM45Q8IUH3 476 aaKnown RBP16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 LIX1LQ8IVB5 337 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 OR4D11Q8NGI4 311 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 SLC41A3Q96GZ6 507 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 HSH2DQ96JZ2 352 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 WFDC6Q9BQY6 131 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 UCK2Q9BZX2 261 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 SLC24A3Q9HC58 644 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 SLC7A7Q9UM01 511 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 PROCRQ9UNN8 238 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 PTPN13Q12923 2485 aa16.74■□□□□ 0.27
CYSTM1-201ENST00000261811 IGHV3-15A0A0B4J1V0 119 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 LIPT2A6NK58 231 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 MSTNO14793 375 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 ARPC2O15144 300 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 SMAD9O15198 467 aaKnown RBP16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 NPIPB7O75200 414 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 IMPDH2P12268 514 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 ITGA2P17301 1181 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 TNFRSF1BP20333 461 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 RPS5P46782 204 aaKnown RBP16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 ST3GAL3Q11203 375 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 PDK3Q15120 406 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 TMEM225Q6GV28 225 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 VTCN1Q7Z7D3 282 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 OR6S1Q8NH40 331 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 ABHD3Q8WU67 409 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 MCUR1Q96AQ8 359 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 SLC25A36Q96CQ1 311 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 DNAJA3Q96EY1 480 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 PRRC1Q96M27 445 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 HS6ST2Q96MM7 605 aa16.73■□□□□ 0.27
CYSTM1-201ENST00000261811 BTBD10Q9BSF8 475 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms