RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 LSAMPQ13449 338 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 AQP6Q13520 282 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 TMEM164Q5U3C3 297 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 ZNF367Q7RTV3 350 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 DEFB124Q8NES8 71 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 TAAR8Q969N4 342 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 METTL7AQ9H8H3 244 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 BAIAP2Q9UQB8 552 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 ERGIC3Q9Y282 383 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 FARSAQ9Y285 508 aaKnown RBP20.31■□□□□ 0.84
SIX3-201ENST00000260653 DMXL1Q9Y485 3027 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 A0A1W2PQ72 361 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 ZC3H12DA2A288 527 aaKnown RBP20.31■□□□□ 0.84
SIX3-201ENST00000260653 GABARAPO95166 117 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 IGHEP01854 428 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 RAB40ALP0C0E4 278 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 TMEM44Q2T9K0 475 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 STPG1Q5TH74 334 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 NIPAL3Q6P499 406 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 B3GLCTQ6Y288 498 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 SLC43A2Q8N370 569 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 CYB561A3Q8NBI2 242 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 NPAS1Q99742 590 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 GPN2Q9H9Y4 310 aaPredicted RBP20.31■□□□□ 0.84
SIX3-201ENST00000260653 H2AFY2Q9P0M6 372 aaPredicted RBP20.31■□□□□ 0.84
SIX3-201ENST00000260653 CHRNA9Q9UGM1 479 aa20.31■□□□□ 0.84
SIX3-201ENST00000260653 LSM2Q9Y333 95 aaKnown RBP20.31■□□□□ 0.84
SIX3-201ENST00000260653 RIF1Q5UIP0 2472 aaKnown RBP20.31■□□□□ 0.84
SIX3-201ENST00000260653 RIIAD1A6NNX1 92 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 LRP3O75074 770 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 HTR1FP30939 366 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 RPL4P36578 427 aaKnown RBP20.3■□□□□ 0.84
SIX3-201ENST00000260653 POLR2HP52434 150 aaKnown RBP20.3■□□□□ 0.84
SIX3-201ENST00000260653 CRMP1Q14194 572 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 ARMCX4Q5H9R4 360 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 C1QL3Q5VWW1 255 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 ARHGAP11AQ6P4F7 1023 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 GRINAQ7Z429 371 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 MOSPD2Q8NHP6 518 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 IER3IP1Q9Y5U9 82 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 CPAMD8Q8IZJ3 1885 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 ZNF292O60281 2723 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 TMED7-TICAM2A0A0A6YYA0 188 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 HTR3EA5X5Y0 456 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 ANKUB1A6NFN9 424 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 BLOC1S5-TXNDC5H3BN57 136 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 ETV1P50549 477 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 ITGADQ13349 1161 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 ZNF791Q3KP31 576 aaPredicted RBP20.3■□□□□ 0.84
SIX3-201ENST00000260653 ADGRG3Q86Y34 549 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 SLC15A4Q8N697 577 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 OR4F15Q8NGB8 312 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 LIPHQ8WWY8 451 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 PTP4A1Q93096 173 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 TMED7Q9Y3B3 224 aa20.3■□□□□ 0.84
SIX3-201ENST00000260653 SUSD5O60279 629 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 ASAH2BP0C7U1 165 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 AQP2P41181 271 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 LSM3P62310 102 aaKnown RBP20.29■□□□□ 0.84
SIX3-201ENST00000260653 NFATC3Q12968 1075 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 SPCS2Q15005 226 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 GLRX5Q86SX6 157 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 SLC37A3Q8NCC5 494 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 RPL3LQ92901 407 aaKnown RBP20.29■□□□□ 0.84
SIX3-201ENST00000260653 MGLLQ99685 303 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 FGF20Q9NP95 211 aaPredicted RBP20.29■□□□□ 0.84
SIX3-201ENST00000260653 PPP4R1LQ9P1A2 415 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 CNOT1A5YKK6 2376 aaKnown RBP20.29■□□□□ 0.84
SIX3-201ENST00000260653 EML6Q6ZMW3 1958 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 PRR23D1E9PI22 279 aaPredicted RBP20.29■□□□□ 0.84
SIX3-201ENST00000260653 PRR23D2P0DMB1 279 aaPredicted RBP20.29■□□□□ 0.84
SIX3-201ENST00000260653 ZNF3P17036 446 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 HK1P19367 917 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 RNLSQ5VYX0 342 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 ARSKQ6UWY0 536 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 GID4Q8IVV7 300 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 NANOGP1Q8N7R0 232 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 RELTQ969Z4 430 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 MND1Q9BWT6 205 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 FBXL4Q9UKA2 621 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 HIF3AQ9Y2N7 669 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 WIF1Q9Y5W5 379 aa20.29■□□□□ 0.84
SIX3-201ENST00000260653 TMEM72A0PK05 275 aa20.28■□□□□ 0.84
SIX3-201ENST00000260653 SLC25A12O75746 678 aa20.28■□□□□ 0.84
SIX3-201ENST00000260653 CLUP10909 449 aa20.28■□□□□ 0.84
SIX3-201ENST00000260653 HIST1H1CP16403 213 aaKnown RBP20.28■□□□□ 0.84
SIX3-201ENST00000260653 ZNF182P17025 639 aaPredicted RBP20.28■□□□□ 0.84
SIX3-201ENST00000260653 F8A1P23610 371 aa20.28■□□□□ 0.84
SIX3-201ENST00000260653 CASP3P42574 277 aa20.28■□□□□ 0.84
SIX3-201ENST00000260653 PRPS1P60891 318 aa20.28■□□□□ 0.84
SIX3-201ENST00000260653 RPS15P62841 145 aaKnown RBP20.28■□□□□ 0.84
SIX3-201ENST00000260653 KLHL12Q53G59 568 aa20.28■□□□□ 0.84
SIX3-201ENST00000260653 IL20RBQ6UXL0 311 aa20.28■□□□□ 0.84
SIX3-201ENST00000260653 DPY19L2P2Q6ZN68 376 aa20.28■□□□□ 0.84
SIX3-201ENST00000260653 ESX1Q8N693 406 aa20.28■□□□□ 0.84
SIX3-201ENST00000260653 CDCP1Q9H5V8 836 aa20.28■□□□□ 0.84
SIX3-201ENST00000260653 KLHL1Q9NR64 748 aa20.28■□□□□ 0.84
SIX3-201ENST00000260653 VDAC3Q9Y277 283 aa20.28■□□□□ 0.84
SIX3-201ENST00000260653 CHCHD2Q9Y6H1 151 aaPredicted RBP20.28■□□□□ 0.84
SIX3-201ENST00000260653 PCSK5Q92824 1860 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms