RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 IGLON5A6NGN9 336 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 MCRIP1C9JLW8 97 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 G3V3G9 751 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 M0R082 166 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 AZIN1O14977 448 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 SIVA1O15304 175 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 YY2O15391 372 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 ANXA9O76027 345 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 FDXRP22570 491 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 VIPR2P41587 438 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 MMP15P51511 669 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 CHD3Q12873 2000 aaKnown RBP7.16□□□□□ -1.26
GPNMB-201ENST00000258733 CAMK2GQ13555 558 aaPredicted RBP7.16□□□□□ -1.26
GPNMB-201ENST00000258733 NFATC4Q14934 902 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 UNC50Q53HI1 259 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 MORN1Q5T089 497 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 ZNF691Q5VV52 312 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 DCAF12L2Q5VW00 463 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 ZNF660Q6AZW8 331 aaPredicted RBP7.16□□□□□ -1.26
GPNMB-201ENST00000258733 FAAP20Q6NZ36 180 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 SLC35E3Q7Z769 313 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 TSPAN33Q86UF1 283 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 HIST3H2BBQ8N257 126 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 OR4C5Q8NGB2 326 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 OR4S1Q8NGB4 309 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 DCAF4Q8WV16 495 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 DNAJB3Q8WWF6 145 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 PSMG2Q969U7 264 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 NTNG2Q96CW9 530 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 CNTNAP3BQ96NU0 1288 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 BOCQ9BWV1 1114 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 CNTNAP3Q9BZ76 1288 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 BOLA2Q9H3K6 86 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 ZBTB26Q9HCK0 441 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 LTB4R2Q9NPC1 389 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 KCPQ6ZWJ8 1503 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 C10orf71Q711Q0 1435 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 A0A087WUJ7 227 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 MGAT4DA6NG13 374 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 SULT2B1O00204 365 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 SLC35E2BP0CK96 405 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 SLC35E2P0CK97 266 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 GZMBP10144 247 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 FABP4P15090 132 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 PIGAP37287 484 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 MRPL19P49406 292 aaKnown RBP7.16□□□□□ -1.26
GPNMB-201ENST00000258733 CSNK2A1P68400 391 aaPredicted RBP7.16□□□□□ -1.26
GPNMB-201ENST00000258733 SPIBQ01892 262 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 ABHD18Q0P651 414 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 GTF2H3Q13889 308 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 PLAC9Q5JTB6 97 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 SPPL2CQ8IUH8 684 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 GPC2Q8N158 579 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 FAM169BQ8N8A8 192 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 CSNK2A3Q8NEV1 391 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 LMO3Q8TAP4 145 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 SHISA4Q96DD7 197 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 CMBLQ96DG6 245 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 DIRAS2Q96HU8 199 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 PCDHB18PQ96TA0 734 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 AMBRA1Q9C0C7 1298 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 PORCNQ9H237 461 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 MTHFD2LQ9H903 347 aaPredicted RBP7.16□□□□□ -1.26
GPNMB-201ENST00000258733 SLC2A9Q9NRM0 540 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 RAD18Q9NS91 495 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 RHCGQ9UBD6 479 aa7.16□□□□□ -1.26
GPNMB-201ENST00000258733 AQP7P3A6NL99 342 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 TLR4O00206 839 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 OR7A17O14581 309 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 MFSD11O43934 449 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 CST4P01036 141 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 UCHL1P09936 223 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 GKN3PP0CG01 181 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 FGF3P11487 239 aaPredicted RBP7.15□□□□□ -1.26
GPNMB-201ENST00000258733 ITGB5P18084 799 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 VIPR1P32241 457 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 TIMP3P35625 211 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 MPLP40238 635 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 SLC19A1P41440 591 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 METAP2P50579 478 aaKnown RBP eCLIP7.15□□□□□ -1.26
GPNMB-201ENST00000258733 HTRA3P83110 453 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 PRR5P85299 388 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 ABRAXAS2Q15018 415 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 RAB35Q15286 201 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 NTRK3Q16288 839 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 DRAM2Q6UX65 266 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 MOB3CQ70IA8 216 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 FAM220AQ7Z4H9 259 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 CMTM1Q8IZ96 169 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 BCL2L2Q92843 193 aaPredicted RBP7.15□□□□□ -1.26
GPNMB-201ENST00000258733 ISL2Q96A47 359 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 ZNF419Q96HQ0 510 aaPredicted RBP7.15□□□□□ -1.26
GPNMB-201ENST00000258733 LCORQ96JN0 433 aaPredicted RBP7.15□□□□□ -1.26
GPNMB-201ENST00000258733 PRAP1Q96NZ9 151 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 OR52E6Q96RD3 313 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 ZSCAN10Q96SZ4 725 aaPredicted RBP7.15□□□□□ -1.26
GPNMB-201ENST00000258733 PIMREGQ9BSJ6 248 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 DCP1AQ9NPI6 582 aaPredicted RBP7.15□□□□□ -1.26
GPNMB-201ENST00000258733 TMPRSS4Q9NRS4 437 aa7.15□□□□□ -1.26
GPNMB-201ENST00000258733 PITPNC1Q9UKF7 332 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms