RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 TOR1AIP2Q8NFQ8 470 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 GFI1Q99684 422 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 MS4A7Q9GZW8 240 aaPredicted RBP9.3□□□□□ -0.92
COPB1-201ENST00000249923 PHF11Q9UIL8 331 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 CLDN16Q9Y5I7 305 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 BRWD1Q9NSI6 2320 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 RTTNQ86VV8 2226 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 A0A1B0GWA3 101 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 PRKNO60260 465 aaPredicted RBP9.3□□□□□ -0.92
COPB1-201ENST00000249923 SAGP10523 405 aaPredicted RBP9.3□□□□□ -0.92
COPB1-201ENST00000249923 ATF1P18846 271 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 SNTA1Q13424 505 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 ADAM15Q13444 863 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 KIR2DS3Q14952 304 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 TMEM44Q2T9K0 475 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 LRRC37A5PQ49AS3 106 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 ESCO2Q56NI9 601 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 BICRALQ6AI39 1079 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 FAAP20Q6NZ36 180 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 HAVCR2Q8TDQ0 301 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 SMPDL3BQ92485 455 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 MICU1Q9BPX6 476 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 THAP7Q9BT49 309 aaPredicted RBP9.3□□□□□ -0.92
COPB1-201ENST00000249923 GON7Q9BXV9 100 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 ZNF346Q9UL40 294 aaKnown RBP9.3□□□□□ -0.92
COPB1-201ENST00000249923 ADAM18Q9Y3Q7 739 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 HEBP2Q9Y5Z4 205 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 SEC16AO15027 2179 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 LOC100509620A0A075B734 347 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 A0A087WV62 115 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 M0R233 179 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 SLC43A1O75387 559 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 KHDRBS3O75525 346 aaKnown RBP9.3□□□□□ -0.92
COPB1-201ENST00000249923 RASGRP1O95267 797 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 ALDOBP05062 364 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 ANKRD34CP0C6C1 535 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 EN2P19622 333 aaPredicted RBP9.3□□□□□ -0.92
COPB1-201ENST00000249923 NT5EP21589 574 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 PTBP1P26599 531 aaKnown RBP eCLIP9.3□□□□□ -0.92
COPB1-201ENST00000249923 GRPRP30550 384 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 NTSR1P30989 418 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 MAGEB1P43366 347 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 DEFB110Q30KQ9 67 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 AMZ1Q400G9 498 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 LINC00114Q6XXX2 140 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 CEACAM19Q7Z692 300 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 LRRC28Q86X40 367 aaPredicted RBP9.3□□□□□ -0.92
COPB1-201ENST00000249923 RNF113BQ8IZP6 322 aaKnown RBP9.3□□□□□ -0.92
COPB1-201ENST00000249923 GHSRQ92847 366 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 RFT1Q96AA3 541 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 KLHDC3Q9BQ90 382 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 TRIM36Q9NQ86 728 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 ZNF69Q9UC07 566 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 FREM2Q5SZK8 3169 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 IDSB3KWA1 339 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 GALR3O60755 368 aaPredicted RBP9.29□□□□□ -0.92
COPB1-201ENST00000249923 AGR2O95994 175 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 UCHL1P09936 223 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 PTHLHP12272 177 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 LAMP2P13473 410 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 HIST1H1CP16403 213 aaKnown RBP9.29□□□□□ -0.92
COPB1-201ENST00000249923 NPR2P20594 1047 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 DLX2Q07687 328 aaPredicted RBP9.29□□□□□ -0.92
COPB1-201ENST00000249923 TP53I3Q53FA7 332 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 EIPR1Q53HC9 387 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 NPSR1Q6W5P4 371 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 C7orf61Q8IZ16 206 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 CDRT4Q8N9R6 151 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 ZBTB44Q8NCP5 570 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 OR11H7Q8NGC8 314 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 OR52R1Q8NGF1 315 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 OR8K3Q8NH51 312 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 OR51Q1Q8NH59 317 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 ZMYND19Q96E35 227 aaPredicted RBP9.29□□□□□ -0.92
COPB1-201ENST00000249923 MRGPRX1Q96LB2 322 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 ZFYVE21Q9BQ24 234 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 METTL17Q9H7H0 456 aaPredicted RBP9.29□□□□□ -0.92
COPB1-201ENST00000249923 CHRNA9Q9UGM1 479 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 ICAM5Q9UMF0 924 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 COPS3Q9UNS2 423 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 SLC35A3Q9Y2D2 325 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 TDRD6O60522 2096 aaKnown RBP9.29□□□□□ -0.92
COPB1-201ENST00000249923 MCIDASD6RGH6 385 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 CHP2O43745 196 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 FMO6PO60774 539 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 SLC19A2O60779 497 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 SOX30O94993 753 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 GPR75O95800 540 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 C1QBP02746 253 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 HOXB2P14652 356 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 CFL1P23528 166 aaKnown RBP9.29□□□□□ -0.92
COPB1-201ENST00000249923 PYCR1P32322 319 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 CLDN12P56749 244 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 ZNF542PQ5EBM4 170 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 TMEM92Q6UXU6 159 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 RNF44Q7L0R7 432 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 ZNF655Q8N720 491 aaPredicted RBP9.29□□□□□ -0.92
COPB1-201ENST00000249923 SDR9C7Q8NEX9 313 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 OR52L1Q8NGH7 329 aa9.29□□□□□ -0.92
COPB1-201ENST00000249923 BAHD1Q8TBE0 780 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms