RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 SERPINA3P01011 423 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 IGHV4-34P06331 123 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 CCINQ13939 588 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 FGFBP1Q14512 234 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 NNATQ16517 81 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 ZNF767PQ75MW2 155 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 SIX5Q8N196 739 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 FAM109AQ8N4B1 249 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 ZNRF4Q8WWF5 429 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 RIT1Q92963 219 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 CNN2Q99439 309 aaKnown RBP13.2□□□□□ -0.3
HIF3A-202ENST00000244303 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.2□□□□□ -0.3
HIF3A-202ENST00000244303 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.2□□□□□ -0.3
HIF3A-202ENST00000244303 NUDT15Q9NV35 164 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 RPS6KB2Q9UBS0 482 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 ICAM5Q9UMF0 924 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 TP53BP1Q12888 1972 aaPredicted RBP13.2□□□□□ -0.3
HIF3A-202ENST00000244303 TRAV1-2A0A0B4J238 106 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 PRAMEF26H0Y7S4 382 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 IMPA2O14732 288 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 CD3GP09693 182 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 OR2T7P0C7T2 308 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 EPXP11678 715 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 RABIFP47224 123 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 GBX2P52951 348 aaPredicted RBP13.2□□□□□ -0.3
HIF3A-202ENST00000244303 ACTA2P62736 377 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 ACTG2P63267 376 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 GXYLT1Q4G148 440 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 LAMTOR1Q6IAA8 161 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 LYPD4Q6UWN0 246 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 NPSR1Q6W5P4 371 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 ESPNLQ6ZVH7 1005 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 CCDC28AQ8IWP9 274 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 SLC35F2Q8IXU6 374 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 SLC43A2Q8N370 569 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 RCBTB1Q8NDN9 531 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 OR2T27Q8NH04 317 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 SPACA7Q96KW9 195 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 VSTM2LQ96N03 204 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 GAS2L1Q99501 681 aaPredicted RBP13.2□□□□□ -0.3
HIF3A-202ENST00000244303 ZNF576Q9H609 170 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 BRD7Q9NPI1 651 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 HCN3Q9P1Z3 774 aa13.2□□□□□ -0.3
HIF3A-202ENST00000244303 A0A0A6YYC8 382 aaPredicted RBP13.19□□□□□ -0.3
HIF3A-202ENST00000244303 OR5K3A6NET4 321 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 I3L1I5 382 aaPredicted RBP13.19□□□□□ -0.3
HIF3A-202ENST00000244303 FLRT2O43155 660 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 RPS11P62280 158 aaKnown RBP eCLIP13.19□□□□□ -0.3
HIF3A-202ENST00000244303 SIRPAP78324 504 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 DGCR2P98153 550 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 GGTLC2Q14390 218 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 GAS6Q14393 721 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 CDONQ4KMG0 1287 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 FAM205BPQ63HN1 556 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 CREB3L2Q70SY1 520 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 ZNF550Q7Z398 422 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 OOSP2Q86WS3 158 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 SYS1Q8N2H4 156 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 TOMM5Q8N4H5 51 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 BMPERQ8N8U9 685 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 POMGNT2Q8NAT1 580 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 SNX33Q8WV41 574 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 YIPF5Q969M3 257 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 SGTBQ96EQ0 304 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 ZFP3Q96NJ6 502 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 OR14A2Q96R54 314 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 TRAF4Q9BUZ4 470 aaPredicted RBP13.19□□□□□ -0.3
HIF3A-202ENST00000244303 MKKSQ9NPJ1 570 aaPredicted RBP13.19□□□□□ -0.3
HIF3A-202ENST00000244303 GNG8Q9UK08 70 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 MRPS7Q9Y2R9 242 aaKnown RBP13.19□□□□□ -0.3
HIF3A-202ENST00000244303 KNL1Q8NG31 2342 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 TRBV2A0A0J9YWF9 115 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 UBL3O95164 117 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 DHFRP00374 187 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 RPL4P36578 427 aaKnown RBP13.19□□□□□ -0.3
HIF3A-202ENST00000244303 STX4Q12846 297 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 EIF2B5Q13144 721 aaKnown RBP13.19□□□□□ -0.3
HIF3A-202ENST00000244303 FCN2Q15485 313 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 ZNF141Q15928 474 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 HACD4Q5VWC8 232 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 KIAA0895LQ68EN5 471 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 ARHGEF39Q8N4T4 335 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 ZPLD1Q8TCW7 415 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 RBM18Q96H35 190 aaKnown RBP13.19□□□□□ -0.3
HIF3A-202ENST00000244303 LRFN5Q96NI6 719 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 NMNAT3Q96T66 252 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 PDCD1LG2Q9BQ51 273 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 GSDMCQ9BYG8 508 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 DPAGT1Q9H3H5 408 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 DIABLOQ9NR28 239 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 ABRACLQ9P1F3 81 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 COPS3Q9UNS2 423 aa13.19□□□□□ -0.3
HIF3A-202ENST00000244303 AK6Q9Y3D8 172 aaKnown RBP13.19□□□□□ -0.3
HIF3A-202ENST00000244303 TMEM131Q92545 1883 aa13.18□□□□□ -0.3
HIF3A-202ENST00000244303 KIR2DS5A0A0G2JLQ3 304 aa13.18□□□□□ -0.3
HIF3A-202ENST00000244303 A0A0G2JNG1 304 aa13.18□□□□□ -0.3
HIF3A-202ENST00000244303 OR2W5A6NFC9 320 aa13.18□□□□□ -0.3
HIF3A-202ENST00000244303 NPIPB9F8W1W9 429 aa13.18□□□□□ -0.3
HIF3A-202ENST00000244303 KIR2DS3K7RE56 304 aa13.18□□□□□ -0.3
HIF3A-202ENST00000244303 SELENOFO60613 162 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms