RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 SLC22A25Q6T423 547 aa12.18□□□□□ -0.46
DDX39A-201ENST00000242776 PGAM4Q8N0Y7 254 aa12.18□□□□□ -0.46
DDX39A-201ENST00000242776 CDRT4Q8N9R6 151 aa12.18□□□□□ -0.46
DDX39A-201ENST00000242776 JADE3Q92613 823 aa12.18□□□□□ -0.46
DDX39A-201ENST00000242776 CPPED1Q9BRF8 314 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-201ENST00000242776 ACTRT3Q9BYD9 372 aa12.18□□□□□ -0.46
DDX39A-201ENST00000242776 C1orf21Q9H246 121 aa12.18□□□□□ -0.46
DDX39A-201ENST00000242776 SLC6A13Q9NSD5 602 aa12.18□□□□□ -0.46
DDX39A-201ENST00000242776 SLC25A37Q9NYZ2 338 aa12.18□□□□□ -0.46
DDX39A-201ENST00000242776 GMEB1Q9Y692 573 aa12.18□□□□□ -0.46
DDX39A-201ENST00000242776 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 DUXAA6NLW8 204 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 ALG1L2C9J202 215 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 FXYD1O00168 92 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 PRKD3O94806 890 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 AGR2O95994 175 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 IGHV3-9P01782 118 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 HMGN2P05204 90 aaKnown RBP12.17□□□□□ -0.46
DDX39A-201ENST00000242776 PABPC4LP0CB38 370 aaKnown RBP12.17□□□□□ -0.46
DDX39A-201ENST00000242776 HPGDP15428 266 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 MATN1P21941 496 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 TTKP33981 857 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 CHRNEQ04844 493 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 CD226Q15762 336 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 TMEM176BQ3YBM2 270 aaPredicted RBP12.17□□□□□ -0.46
DDX39A-201ENST00000242776 DNAL1Q4LDG9 190 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 FAM120AOSQ5T036 256 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 CCNJQ5T5M9 372 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 MSRB3Q8IXL7 192 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 FBXL14Q8N1E6 418 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 CLEC4FQ8N1N0 589 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 RBM15BQ8NDT2 890 aaKnown RBP12.17□□□□□ -0.46
DDX39A-201ENST00000242776 OR52N5Q8NH56 324 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 ADAMTS15Q8TE58 950 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 CPNE4Q96A23 557 aaPredicted RBP12.17□□□□□ -0.46
DDX39A-201ENST00000242776 MUCL1Q96DR8 90 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 GIMAP5Q96F15 307 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 AURKBQ96GD4 344 aaPredicted RBP12.17□□□□□ -0.46
DDX39A-201ENST00000242776 THUMPD3Q9BV44 507 aaKnown RBP12.17□□□□□ -0.46
DDX39A-201ENST00000242776 C1QTNF6Q9BXI9 259 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 SPAG4Q9NPE6 437 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 TIGARQ9NQ88 270 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 THUMPD1Q9NXG2 353 aaKnown RBP12.17□□□□□ -0.46
DDX39A-201ENST00000242776 KCNS2Q9ULS6 477 aa12.17□□□□□ -0.46
DDX39A-201ENST00000242776 A0A1W2PNR3 127 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 EFNA2O43921 213 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 YES1P07947 543 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 ALOX5P09917 674 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 SLC25A16P16260 332 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 USF1P22415 310 aaPredicted RBP12.16□□□□□ -0.46
DDX39A-201ENST00000242776 CRATP43155 626 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 FABP6P51161 128 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 MTPNP58546 118 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 DSCR9P59020 149 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 PSME3P61289 254 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 LSM11P83369 360 aaKnown RBP eCLIP12.16□□□□□ -0.46
DDX39A-201ENST00000242776 SLC25A3Q00325 362 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 CARTPTQ16568 116 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 C11orf71Q6IPW1 123 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 NANOGP8Q6NSW7 305 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 CDC73Q6P1J9 531 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 C8orf82Q6P1X6 216 aaPredicted RBP12.16□□□□□ -0.46
DDX39A-201ENST00000242776 B3GLCTQ6Y288 498 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 RNF130Q86XS8 419 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 MUC15Q8N387 334 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 B4GALNT2Q8NHY0 566 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 FBXO27Q8NI29 283 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 PNPT1Q8TCS8 783 aaKnown RBP12.16□□□□□ -0.46
DDX39A-201ENST00000242776 MIPOL1Q8TD10 442 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 ZNF300Q96RE9 604 aaPredicted RBP12.16□□□□□ -0.46
DDX39A-201ENST00000242776 STACQ99469 402 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 ECSITQ9BQ95 431 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 NANOGQ9H9S0 305 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 CBLN4Q9NTU7 201 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 GPATCH2Q9NW75 528 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 TMEM160Q9NX00 188 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 GIN1Q9NXP7 522 aa12.16□□□□□ -0.46
DDX39A-201ENST00000242776 NPIPA5A0A0B4J1W7 369 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 LOC100289279A0A1B0GTE1 492 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 TMEM247A6NEH6 219 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 ELOA3DA6NLF2 546 aaPredicted RBP12.15□□□□□ -0.46
DDX39A-201ENST00000242776 NPIPA7E9PJI5 369 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 SCDO00767 359 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 GYG2O15488 501 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 OIP5O43482 229 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 RRP9O43818 475 aaKnown RBP12.15□□□□□ -0.46
DDX39A-201ENST00000242776 KIAA0513O60268 411 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 DNAJA2O60884 412 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 RAD51DO75771 328 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 NPIPA8P0DM63 369 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 ACP2P11117 423 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 IGHV1-2P23083 117 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 SLC6A2P23975 617 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 RGNQ15493 299 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 ZSCAN26Q16670 478 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 NDUFAF6Q330K2 333 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 ELOA3BQ3SY89 546 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.15□□□□□ -0.46
DDX39A-201ENST00000242776 ATAD3BQ5T9A4 648 aa12.15□□□□□ -0.46
DDX39A-201ENST00000242776 TNFAIP8L2Q6P589 184 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms