RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 C20orf85Q9H1P6 137 aa12.96□□□□□ -0.34
TARDBP-201ENST00000240185 FER1L4A9Z1Z3 1794 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 NPIPA5A0A0B4J1W7 369 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 TRAF3IP2O43734 574 aaPredicted RBP12.95□□□□□ -0.34
TARDBP-201ENST00000240185 KLF8O95600 359 aaPredicted RBP12.95□□□□□ -0.34
TARDBP-201ENST00000240185 CBX7O95931 251 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 SCG5P05408 212 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 UBL4AP11441 157 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 RAB11AP62491 216 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 C6orf132Q5T0Z8 1188 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 KCTD11Q693B1 232 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 ADAMTS18Q8TE60 1221 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 RAB7BQ96AH8 199 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 INSL5Q9Y5Q6 135 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 COCHO43405 550 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 APBB3O95704 486 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 C1QBP02746 253 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 PTGER4P35408 488 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 SNCAP37840 140 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 SLC6A8P48029 635 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 RAB28P51157 221 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 ZNF789Q5FWF6 425 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 ZMAT1Q5H9K5 638 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 TOR2AQ5JU69 321 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 RNLSQ5VYX0 342 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 STEAP1BQ6NZ63 245 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 WDTC1Q8N5D0 677 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 DEFB119Q8N690 84 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 IRF7Q92985 503 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 FYTTD1Q96QD9 318 aaKnown RBP12.95□□□□□ -0.34
TARDBP-201ENST00000240185 A0A087WUU8 490 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 IGFBP1P08833 259 aaPredicted RBP12.95□□□□□ -0.34
TARDBP-201ENST00000240185 SHC1P29353 583 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 HOXD11P31277 338 aaPredicted RBP12.95□□□□□ -0.34
TARDBP-201ENST00000240185 SRYQ05066 204 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 RING1Q06587 406 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 KIAA0907Q7Z7F0 614 aaPredicted RBP12.95□□□□□ -0.34
TARDBP-201ENST00000240185 SFT2D1Q8WV19 159 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 KIAA1143Q96AT1 154 aaPredicted RBP12.95□□□□□ -0.34
TARDBP-201ENST00000240185 DDOQ99489 341 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 RTP3Q9BQQ7 232 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 SEMA4GQ9NTN9 838 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 OR6C68A6NDL8 312 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 SLC9B1P1A6NJY1 282 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 UGDHO60701 494 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 CLDN1O95832 211 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 P04436 131 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 CHRM4P08173 479 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 ATP1B3P54709 279 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 NHSL2Q5HYW2 709 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 PLCXD3Q63HM9 321 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 KANSL1Q7Z3B3 1105 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 OR56B1Q8NGI3 324 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 OR14L1PQ8NHC6 308 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 FOXN4Q96NZ1 517 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 OR5B2Q96R09 309 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 TMEM175Q9BSA9 504 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 NOX4Q9NPH5 578 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 SLC23A2Q9UGH3 650 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 PSORS1C1Q9UIG5 152 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 UBR1Q8IWV7 1749 aa12.95□□□□□ -0.34
TARDBP-201ENST00000240185 CD79AP11912 226 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 EEF1A2Q05639 463 aaKnown RBP12.94□□□□□ -0.34
TARDBP-201ENST00000240185 COTL1Q14019 142 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 NDUFAF7Q7L592 441 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 MDGA2Q7Z553 956 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 LFNGQ8NES3 379 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 KHSRPQ92945 711 aaKnown RBP eCLIP12.94□□□□□ -0.343e-10■■■■□ 22.6
TARDBP-201ENST00000240185 SH3BGRL2Q9UJC5 107 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 LRIT2A6NDA9 550 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 GJE1A6NN92 205 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 F6UZH7 168 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 GABARAPO95166 117 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 GJB5O95377 273 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 HPNP05981 417 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 ACKR3P25106 362 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 SLC1A3P43003 542 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 C1orf61Q13536 156 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 DEFB115Q30KQ5 88 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 KIAA0895LQ68EN5 471 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 RYDENQ9NUL5 291 aaKnown RBP12.94□□□□□ -0.34
TARDBP-201ENST00000240185 ANKRD12Q6UB98 2062 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 RNF212BA8MTL3 300 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 H7BYZ3 331 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 TRAPPC2P0DI81 140 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 TRAPPC2BP0DI82 140 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 G0S2P27469 103 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 CATR1Q13166 79 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 FIGLAQ6QHK4 219 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 ZC3H3Q8IXZ2 948 aaKnown RBP12.94□□□□□ -0.34
TARDBP-201ENST00000240185 LRFN5Q96NI6 719 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 NRIP3Q9NQ35 241 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 SLC22A11Q9NSA0 550 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 PLIN4Q96Q06 1357 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 OR7C1O76099 320 aaPredicted RBP12.94□□□□□ -0.34
TARDBP-201ENST00000240185 PMS2P2O95744 297 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 LPLP06858 475 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 APLNRP35414 380 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 MTNR1BP49286 362 aa12.94□□□□□ -0.34
TARDBP-201ENST00000240185 PSMF1Q92530 271 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms