RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CD82P27701 267 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 RPS5P46782 204 aaKnown RBP13.8□□□□□ -0.2
HDHD3-201ENST00000238379 ATP1A4Q13733 1029 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 TMEM44Q2T9K0 475 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 GXYLT1Q4G148 440 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 PRAMEF20Q5VT98 475 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 UBE2UQ5VVX9 321 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 GPR107Q5VW38 600 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 NXNL2Q5VZ03 156 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 RAB43Q86YS6 212 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 CPOQ8IVL8 374 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 TMEM156Q8N614 296 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 C10orf53Q8N6V4 93 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 WDSUB1Q8N9V3 476 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 PAQR8Q8TEZ7 354 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 PSMF1Q92530 271 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 NANSQ9NR45 359 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 RSL24D1Q9UHA3 163 aaKnown RBP13.8□□□□□ -0.2
HDHD3-201ENST00000238379 HIF3AQ9Y2N7 669 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 TRAV36DV7A0A075B6V5 113 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 FAM183AA6NL82 134 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 SNTNA6NMZ2 147 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 A8MVM7 634 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 SLC25A12O75746 678 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 LCKP06239 509 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 DCKP27707 260 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 RBMS1P29558 406 aaKnown RBP13.79□□□□□ -0.2
HDHD3-201ENST00000238379 PRPS1P60891 318 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 SLC25A53Q5H9E4 307 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 ZNF468Q5VIY5 522 aaPredicted RBP13.79□□□□□ -0.2
HDHD3-201ENST00000238379 B3GNTL1Q67FW5 361 aaPredicted RBP13.79□□□□□ -0.2
HDHD3-201ENST00000238379 DPY19L2P2Q6ZN68 376 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 CXXC5Q7LFL8 322 aaKnown RBP13.79□□□□□ -0.2
HDHD3-201ENST00000238379 IGFN1Q86VF2 1251 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 SIRT6Q8N6T7 355 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 OR2M3Q8NG83 312 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 FCGR1BQ92637 280 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 RFKQ969G6 155 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 PTDSS2Q9BVG9 487 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 ANGPTL4Q9BY76 406 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 PROK2Q9HC23 129 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 ASCL3Q9NQ33 180 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 NRIP3Q9NQ35 241 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 TAS2R16Q9NYV7 291 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 CHRNA9Q9UGM1 479 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 ZNF229Q9UJW7 825 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.79□□□□□ -0.2
HDHD3-201ENST00000238379 COMMD3-BMI1R4GMX3 469 aa13.79□□□□□ -0.2
HDHD3-201ENST00000238379 BGLAPP02818 100 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 TSPAN19P0C672 248 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 CCL3P10147 92 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 UQCRC1P31930 480 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 MTNR1AP48039 350 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 CDH11P55287 796 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 ANKDD1AQ495B1 522 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 ACER2Q5QJU3 275 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 PLBD1Q6P4A8 553 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 ARHGAP11AQ6P4F7 1023 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 IL22RA1Q8N6P7 574 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 FADS6Q8N9I5 356 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 LRRC75AQ8NAA5 344 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 BBS1Q8NFJ9 593 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 OR52I1Q8NGK6 324 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 MOSPD2Q8NHP6 518 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 C9orf43Q8TAL5 461 aaPredicted RBP13.78□□□□□ -0.2
HDHD3-201ENST00000238379 STK35Q8TDR2 534 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 ADAMTS14Q8WXS8 1223 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 ISOC1Q96CN7 298 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 LGALS12Q96DT0 336 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 TMEM80Q96HE8 168 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 ERMAPQ96PL5 475 aaPredicted RBP13.78□□□□□ -0.2
HDHD3-201ENST00000238379 GPX7Q96SL4 187 aaPredicted RBP13.78□□□□□ -0.2
HDHD3-201ENST00000238379 TAPBPLQ9BX59 468 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 FKRPQ9H9S5 495 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 HPF1Q9NWY4 346 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 FBXL2Q9UKC9 423 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 VDAC3Q9Y277 283 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 FAM186AA6NE01 2351 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 BLOC1S5-TXNDC5H3BN57 136 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 ZNF701M0R085 212 aaPredicted RBP13.78□□□□□ -0.2
HDHD3-201ENST00000238379 ARPC3O15145 178 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 PTHP01270 115 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 ADORA3P0DMS8 318 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 HK1P19367 917 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 AQP2P41181 271 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 APOBEC1P41238 236 aaKnown RBP13.78□□□□□ -0.2
HDHD3-201ENST00000238379 NOVA1P51513 510 aaKnown RBP13.78□□□□□ -0.2
HDHD3-201ENST00000238379 ZNF41P51814 821 aaPredicted RBP13.78□□□□□ -0.2
HDHD3-201ENST00000238379 FOXF1Q12946 379 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 PLPPR5Q32ZL2 321 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 KLHL22Q53GT1 634 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 SLC22A10Q63ZE4 541 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 ZNF420Q8TAQ5 688 aaPredicted RBP13.78□□□□□ -0.2
HDHD3-201ENST00000238379 PTP4A1Q93096 173 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 NMD3Q96D46 503 aaKnown RBP13.78□□□□□ -0.2
HDHD3-201ENST00000238379 RNFT2Q96EX2 444 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 HCAR1Q9BXC0 346 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 OR11A1Q9GZK7 315 aa13.78□□□□□ -0.2
HDHD3-201ENST00000238379 NAA50Q9GZZ1 169 aaKnown RBP13.78□□□□□ -0.2
HDHD3-201ENST00000238379 ADAM18Q9Y3Q7 739 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms