RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 SURF4O15260 269 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 EDIL3O43854 480 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 IFNA17P01571 189 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 PGFP49763 221 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 DUSP3P51452 185 aaPredicted RBP12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 KCNAB1Q14722 419 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 TMEM176BQ3YBM2 270 aaPredicted RBP12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 STEAP3Q658P3 488 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 TANGO2Q6ICL3 276 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 PLPP7Q8NBV4 271 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 OR5D14Q8NGL3 314 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 ZNF582Q96NG8 517 aaPredicted RBP12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 OR14A2Q96R54 314 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 TMPRSS11EQ9UL52 423 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 UBR2Q8IWV8 1755 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 FTCDNL1E5RQL4 147 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 HRO43593 1189 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 ADAMTS4O75173 837 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 ZNF780AO75290 641 aaPredicted RBP12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 ACP2P11117 423 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 SLC2A1P11166 492 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 MLF1P58340 268 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 FRMPD2BQ6IN97 320 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 SUMF2Q8NBJ7 301 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 MUL1Q969V5 352 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 MKRN2Q9H000 416 aaKnown RBP12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 ZNF337Q9Y3M9 751 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 DNAJC25-GNG10A0A024R161 153 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 CEBPZOSA8MTT3 80 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 ENSAO43768 121 aaKnown RBP12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 SRPX2O60687 465 aaPredicted RBP12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 SLC34A2O95436 690 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 APEX1P27695 318 aaKnown RBP12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 TMEM207Q6UWW9 146 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 DCBLD2Q96PD2 775 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 OR6C1Q96RD1 312 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 SLC2A11Q9BYW1 496 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 TSPAN10Q9H1Z9 355 aaPredicted RBP12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 CALHM2Q9HA72 323 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 EMC9Q9Y3B6 208 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 PUS1Q9Y606 427 aaKnown RBP eCLIP12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 ANKRD30BLA7E2S9 258 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 FAM155AB1AL88 458 aaPredicted RBP12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 K7EPK0 472 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 HNRNPA1L2Q32P51 320 aaKnown RBP12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 NIPAL3Q6P499 406 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 FAM71E2Q8N5Q1 922 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 GCDHQ92947 438 aaPredicted RBP12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 RSPRY1Q96DX4 576 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 SYT3Q9BQG1 590 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 C12orf49Q9H741 205 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 BABAM2Q9NXR7 383 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 TAS2R8Q9NYW2 309 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 ACOT7O00154 380 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 IMPA1P29218 277 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 SLC36A2Q495M3 483 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 ZIC5Q96T25 663 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 A0A1B0GTW7 788 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 GLI4P10075 376 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 HTD2P86397 168 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 CLEC14AQ86T13 490 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 THRSPQ92748 146 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 VN1R3Q9BXE9 311 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 PISDQ9UG56 409 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 CSF1P09603 554 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 TACR3P29371 465 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 PRLHRP49683 370 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 RAB40BQ12829 278 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 SLC14A2Q15849 920 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 CPPED1Q9BRF8 314 aaPredicted RBP12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 CROCCQ5TZA2 2017 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 LAMA4Q16363 1823 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 SLC2A10O95528 541 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 CHATP28329 748 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 INHBCP55103 352 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 RACK1P63244 317 aaKnown RBP12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 C14orf28Q4W4Y0 310 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 YOD1Q5VVQ6 348 aaPredicted RBP12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 SHEQ5VZ18 495 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 CMTM1Q8IZ96 169 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 BHLHE23Q8NDY6 225 aa12.66□□□□□ -0.38
TGFBR3-201ENST00000212355 HHLA1C9JL84 531 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 MRPS34P82930 218 aaKnown RBP12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 TCTE1Q5JU00 501 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 TMEM201Q5SNT2 666 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 MARCH3Q86UD3 253 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 CCDC71LQ8N9Z2 235 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 OR52I1Q8NGK6 324 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 MIB2Q96AX9 1013 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 BTBD2Q9BX70 525 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 C1QTNF6Q9BXI9 259 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 AMBRA1Q9C0C7 1298 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 OR10A5Q9H207 317 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 OR10A2Q9H208 303 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 FANCFQ9NPI8 374 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 SEC14L2O76054 403 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 GCH1P30793 250 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 HTR5AP47898 357 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 POLR2HP52434 150 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms