RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 LRRC18Q8N456 261 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 SPERTQ8NA61 448 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 ZNF583Q96ND8 569 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 C1orf198Q9H425 327 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 ZNF696Q9H7X3 374 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 KLHL9Q9P2J3 617 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 FAM230AA0A1W2PPH8 454 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 KLK8O60259 260 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 PEX14O75381 377 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 GYPBP06028 91 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 IFNGR1P15260 489 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 AQP2P41181 271 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 BIDP55957 195 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 SLC10A1Q14973 349 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 GUSBP11Q6P575 273 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 MKXQ8IYA7 352 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 DND1Q8IYX4 353 aaKnown RBP9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 OR5J2Q8NH18 312 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 ALG14Q96F25 216 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 ZNF587Q96SQ5 575 aaPredicted RBP9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 ANKRD60Q9BZ19 345 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 A0A1B0GVC2 190 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 J3QRK9 145 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 K7EQS6 105 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 STK17BO94768 372 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 ACTL6BO94805 426 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 GIPRP48546 466 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 ACTBP60709 375 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 ACTG1P63261 375 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 TRIP6Q15654 476 aaKnown RBP9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 DUSP5Q16690 384 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 COX20Q5RI15 118 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 FAM69AQ5T7M9 428 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 C1orf140Q5VVS0 124 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 ZNF836Q6ZNA1 936 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 ZNF554Q86TJ5 538 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 NT5CQ8TCD5 201 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 FOXRED1Q96CU9 486 aaPredicted RBP9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 MAELQ96JY0 434 aaKnown RBP9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 SGCZQ96LD1 299 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 SLC6A7Q99884 636 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 TCEAL2Q9H3H9 227 aaPredicted RBP9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 NUDT15Q9NV35 164 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 TAS2R8Q9NYW2 309 aa9.58□□□□□ -0.88
NIPAL3-201ENST00000003912 LRRC37AA6NMS7 1700 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 KLK10O43240 276 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 TNFSF14O43557 240 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 DNAJB6O75190 326 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 SORBS2O94875 1100 aaKnown RBP9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 MYF5P13349 255 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 GPX2P18283 190 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 CHMP24386 653 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 AP2S1P53680 142 aaPredicted RBP9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 COL13A1Q5TAT6 717 aaPredicted RBP9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 NDUFAF7Q7L592 441 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 CAMKMTQ7Z624 323 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 AKAP1Q92667 903 aaKnown RBP eCLIP9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 TSLPQ969D9 159 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 APH1AQ96BI3 265 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 PAQR5Q9NXK6 330 aaPredicted RBP9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 CNOT2Q9NZN8 540 aaKnown RBP9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 GSKIPQ9P0R6 139 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 TRBV4-1A0A0J9YWV2 114 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 GNAO1P09471 354 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 ARHGAP11BQ3KRB8 267 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 GDPGP1Q6ZNW5 385 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 ZNF454Q8N9F8 522 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 SLC25A44Q96H78 314 aaPredicted RBP9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 CCDC120Q96HB5 630 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 VSX1Q9NZR4 365 aaPredicted RBP9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 DCDC2BA2VCK2 349 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 TMPRSS11DO60235 418 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 PET100P0DJ07 73 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 STOMP27105 288 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 GPR50Q13585 617 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 RNASE10Q5GAN6 216 aaKnown RBP9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 SLC35D2Q76EJ3 337 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 GPBAR1Q8TDU6 330 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 NECAB3Q96P71 396 aaPredicted RBP9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 TNFRSF13CQ96RJ3 184 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 LMF1Q96S06 567 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 TUBB1Q9H4B7 451 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 ELOVL3Q9HB03 270 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 UBAP1Q9NZ09 502 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 SMCHD1A6NHR9 2005 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 I6L893 689 aaPredicted RBP9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 VAMP5O95183 116 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 MPIG6BO95866 241 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 PPIAP62937 165 aaKnown RBP9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 TCTN1Q2MV58 587 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 COL28A1Q2UY09 1125 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 SAXO2Q658L1 398 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 TMEM205Q6UW68 189 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 ZNF813Q6ZN06 617 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 DPY19L2P2Q6ZN68 376 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 CARFQ8N187 725 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 BCORP1Q8N888 145 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 SLC19A3Q9BZV2 496 aa9.57□□□□□ -0.88
NIPAL3-201ENST00000003912 HMX2A2RU54 273 aa9.56□□□□□ -0.88
NIPAL3-201ENST00000003912 METTL15A6NJ78 407 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms