RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Aqp9Q9JJJ3 295 aa10.89□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Dach1Q9QYB2 751 aa10.89□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 DmtnQ9WV69 405 aa10.89□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Pmm2Q9Z2M7 242 aa10.89□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Ankhd1E9PUR0 2548 aaKnown RBP10.89□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Map1aQ9QYR6 2776 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Klhl15A2AAX3 604 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 D7Ertd443eD2J0Y4 644 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Mybpc1D3YU50 1127 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Susd1E9Q3H4 752 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 MstnO08689 376 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Wnt2bO70283 389 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Grpel2O88396 224 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Irf1P15314 329 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Tcl1aP56280 116 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Nos3P70313 1202 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Trappc13Q3TIR1 417 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Mccc2Q3ULD5 563 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Slc35g3Q5F297 340 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Olfr332Q5NC45 344 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Sco1Q5SUC9 284 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Klhl14Q69ZK5 630 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Il17fQ7TNI7 161 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Clec4b1Q7TS58 209 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Dsg1cQ7TSF0 911 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Pars2Q8CFI5 475 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Vmn1r17Q8R2D8 303 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Duoxa1Q8VE49 341 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Olfr777Q8VFH3 311 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Olfr821Q8VG45 310 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Olfr768Q8VGC4 312 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Dus3lQ91XI1 637 aaKnown RBP10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Bhlhe41Q99PV5 410 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Ykt6Q9CQW1 198 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 CacybpQ9CXW3 229 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Ints12Q9D168 461 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Trp53tg5Q9D976 238 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Apbb2Q9DBR4 760 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 ClcnkaQ9WUB7 687 aa10.88□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Gm28710A0A1B0GR31 962 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Calcoco2A2A6M5 331 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Pramef6A2A8M8 474 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Gm14418A2ARR6 358 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Gm14124A2AU83 715 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Olfr1153A2AVC0 318 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Gm14322A2AW66 358 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Gm14085A2AWR5 660 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Gm42791D3YYB5 209 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Olfr549E9Q542 316 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Olfr640E9Q7P5 314 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Ccdc7bE9Q9Y3 381 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Gm8922F6XVS9 199 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 AldocP05063 363 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Atp1b1P14094 304 aaKnown RBP10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Msr1P30204 458 aaKnown RBP10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Rac3P60764 192 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 H3f3aP84244 136 aaKnown RBP10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Rps3aP97351 264 aaKnown RBP10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Shc1P98083 579 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Rspo3Q2TJ95 277 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Lpcat1Q3TFD2 534 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Cldn34b4Q3V0X2 211 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Ankrd28Q505D1 1053 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Slc23a3Q60850 611 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Rbbp4Q60972 425 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Olfr1288Q7TQY0 312 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Hapln3Q80WM5 359 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Cpne4Q8BLR2 557 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 CcsapQ8QZT2 252 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 IlkapQ8R0F6 392 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Vmn1r220Q8R272 298 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Vmn1r75Q8R289 305 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Thoc1Q8R3N6 657 aaKnown RBP10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 BanpQ8VBU8 548 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Olfr486Q8VFD0 314 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Olfr870Q8VGG4 311 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Memo1Q91VH6 297 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Frs3Q91WJ0 492 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Nt5dc2Q91X76 390 aaKnown RBP10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Pcdhac1Q91Y10 964 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Diras1Q91Z61 198 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 GmppaQ922H4 420 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Znf672Q99LH4 468 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Etv5Q9CXC9 510 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Hspa12bQ9CZJ2 685 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Kat8Q9D1P2 458 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 5530401A14RikQ9D3H9 131 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Tnfrsf21Q9EPU5 655 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Paqr4Q9JJE4 273 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Cnot9Q9JKY0 299 aa10.87□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Igkv4-63A0A0G2JFU6 117 aa10.86□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 A0A286YDG0 184 aa10.86□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 ItpkbB2RXC2 942 aa10.86□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Vmn2r125D3Z3M1 369 aa10.86□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Vmn2r110E9PWD5 858 aa10.86□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Vmn2r103E9PWW0 856 aa10.86□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Gpr137cE9Q343 423 aa10.86□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Il20rbE9Q9A6 308 aa10.86□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 C130060K24RikG3UWA8 416 aa10.86□□□□□ -0.67
Ccdc28a-202ENSMUST00000080860 Esp36G3UZD8 160 aa10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms