RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 UqcrbQ9D855 111 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Wwp2Q9DBH0 870 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 TapbpQ9R233 465 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Trbc2A0A075B5J4 173 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr592E9PYB3 312 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Gm10608E9PZ13 166 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Cdh19E9Q3A7 770 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Slc22a1O08966 556 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 P01808 119 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 P01851 173 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 AdaP03958 352 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Apex1P28352 317 aaKnown RBP7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr13P34984 310 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Bglap3P54615 95 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Dcaf7P61963 342 aaKnown RBP7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Cdh10P70408 788 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 MakQ04859 622 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Faap20Q3UN58 186 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Il15raQ60819 263 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Tlx2Q61663 284 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 BC061237Q6P8I2 184 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Shc4Q6S5L9 626 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 SetmarQ80UJ9 309 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Sec24bQ80ZX0 1251 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Cxcl16Q8BSU2 246 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Rnf26Q8BUH7 424 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Pqlc3Q8C6U2 202 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 BroxQ8K2Q7 411 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Dlgap5Q8K4R9 808 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr1250Q8VGM3 314 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Dach2Q925Q8 634 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Fam69aQ9D6I7 428 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Ppil3Q9D6L8 161 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Snx5Q9D8U8 404 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Tmem225Q9D9S2 230 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Q9DAS2 200 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Ethe1Q9DCM0 254 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Nusap1Q9ERH4 427 aaKnown RBP7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Slco1b2Q9JJL3 689 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Cpn1Q9JJN5 457 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr2Q9QWU6 327 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Smok1Q9QYZ4 484 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Igkv12-44A0A140T8M2 115 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Gm3285A0A1W2P7U0 201 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr740E9PV79 311 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 FaimlJ3QPY3 178 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr889L7N1Y6 314 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Abca4O35600 2310 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 RptnP97347 1118 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Dmrtc1bQ2PMX6 267 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Ankrd42Q3V096 527 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Fam169aQ5XG69 665 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Tas2r107Q7M725 308 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 PigvQ7TPN3 493 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Lamp3Q7TST5 411 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 2810021J22RikQ8BIB6 539 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Acp7Q8BX37 438 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Fbxw14Q8C2Y5 466 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Micu2Q8CD10 432 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Vmn1r200Q8R281 312 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 NagsQ8R4H7 527 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Hsd17b13Q8VCR2 304 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Nkx6-1Q99MA9 365 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Trim2Q9ESN6 744 aaKnown RBP7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Jph1Q9ET80 660 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Sh3bgrlQ9JJU8 114 aaKnown RBP7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Dkk3Q9QUN9 349 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Clca3a1Q9QX15 902 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Nxt1Q9QZV9 140 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 RlimQ9WTV7 600 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Padi1Q9Z185 662 aa7.97□□□□□ -1.13
Trim39-201ENSMUST00000042717 Ckap5A2AGT5 2032 aaKnown RBP7.96□□□□□ -1.13
Trim39-201ENSMUST00000042717 Gm5678A0A1B0GRG8 277 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 BC024063A0A1W2P7G7 749 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Cd209fD3Z1H5 274 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Vmn1r12G5E8G1 307 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Polr1cP52432 346 aaKnown RBP7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Cd38P56528 304 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 EsrrgP62509 458 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Rps15P62843 145 aaKnown RBP7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hdac2P70288 488 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Vmn1r11Q3SXA2 299 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Eml4Q3UMY5 988 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Kctd21Q3URF8 260 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Nox3Q672J9 568 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Olfr298Q7TS06 332 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Luzp2Q8BGY3 345 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Ccdc126Q8BIS8 140 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Rspo4Q8BJ73 228 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Hspa13Q8BM72 471 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 QdprQ8BVI4 241 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Endod1Q8C522 501 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Neurl3Q8CJC5 254 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Il17rcQ8K4C2 698 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Tm4sf5Q91XF2 196 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Abcg5Q99PE8 652 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 NtmQ99PJ0 344 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Tmem176aQ9DCS1 244 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Aph1cQ9DCZ9 258 aa7.96□□□□□ -1.14
Trim39-201ENSMUST00000042717 Abt1Q9QYL7 269 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms