RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Zfp964B2RR88 472 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gcm2O09102 504 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Emc8O70378 207 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 H2-D1P14427 368 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Six5P70178 719 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Adipor2Q8BQS5 386 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Vmn1r75Q8R289 305 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr437Q8VEV1 310 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr836Q8VFJ3 317 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Lap3Q9CPY7 519 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tprg1lQ9DBS2 266 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Adat1Q9JHI2 499 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Clcf1Q9QZM3 225 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Usp18Q9WTV6 368 aa9.63□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Kat6aQ8BZ21 2003 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Igkv12-46A0A140T8P6 115 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Zfp81B8JJZ7 531 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr740E9PV79 311 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gpr52P0C5J4 361 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Slc1a3P56564 543 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Il12rb2P97378 874 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Htr1fQ02284 366 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 B3gnt4Q1RLK6 350 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 InipQ3TXT3 104 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tsr3Q5HZH2 323 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr151Q60893 309 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr787Q7TRI1 312 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Kctd9Q80UN1 339 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Slc30a6Q8BJM5 460 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Ccdc187Q8C5V8 958 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 EloaQ8CB77 773 aaKnown RBP9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Ebf4Q8K4J2 599 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Pex12Q8VC48 359 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Nupr1Q9WTK0 80 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Srpk3Q9Z0G2 565 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gm28710A0A1B0GR31 962 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr1247A2AT78 314 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tex264E9Q137 309 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 EllO08856 602 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Ninj1O70131 152 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Slc11a1P41251 548 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Perm1Q149B8 807 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tmprss11bQ14C59 416 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Lrrc28Q3TX51 367 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gtpbp2Q3UJK4 602 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Calm5Q6W3E0 140 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr769Q8K501 312 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Ptov1Q91VU8 416 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Arrb2Q91YI4 410 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Trip11E9Q512 1976 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr1315-ps1A0A140LI66 314 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Rpl3lE9PWZ3 407 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Zfp169E9Q3R6 731 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Vmn1r14H3BJ46 303 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 H2-ObO35424 271 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tial1P70318 392 aaKnown RBP9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Rps5P97461 204 aaKnown RBP9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 LpoQ5SW46 710 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Dcaf12l2Q8BGW4 469 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 CyrenQ8BHZ5 157 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 AgmoQ8BS35 447 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 PhyhipQ8K0S0 330 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Elac1Q8VEB6 362 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr1316Q8VG12 314 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr821Q8VG45 310 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 D6Wsu163eQ91YN0 552 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 S100a16Q9D708 124 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 TsnaxQ9QZE7 290 aaKnown RBP9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gm31371A0A1D5RM70 265 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gm13271B1AYH9 182 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr610E9Q598 315 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 AlyrefO08583 255 aaKnown RBP9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Prdx4O08807 274 aaKnown RBP9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tcn2O88968 430 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 CpoxP36552 443 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Heatr6Q6P1G0 1184 aaKnown RBP9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Timd4Q6U7R4 343 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr1166Q7TR27 316 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Rbm48Q8K2X2 371 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Rab38Q8QZZ8 211 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Q91V76 315 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Mmp19Q9JHI0 527 aa9.62□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Iglc4A0A0G2JEK5 104 aa9.61□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Vmn2r56E9Q4U5 779 aa9.61□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Rnpepl1G5E872 720 aa9.61□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr1360K9J6X0 313 aa9.61□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gstm3P19639 218 aa9.61□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Hoxc5P32043 222 aa9.61□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 S100a1P56565 94 aa9.61□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Ufd1P70362 307 aa9.61□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Tmem253Q3UNB8 204 aa9.61□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Cyb5d2Q5SSH8 263 aa9.61□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Rpa2Q62193 270 aa9.61□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 DmknQ6P253 517 aa9.61□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Arhgef4Q7TNR9 484 aa9.61□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr1359Q7TQU5 313 aa9.61□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Slc22a29Q8BWG6 551 aa9.61□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Shisa7Q8C3Q5 558 aa9.61□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Wdr37Q8CBE3 496 aa9.61□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 TipinQ91WA1 278 aa9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms