RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 ATP6V1G3Q96LB4 118 aa12.75□□□□□ -0.37
HNRNPU-229ENST00000640440 TMEM204Q9BSN7 226 aa12.75□□□□□ -0.37
HNRNPU-229ENST00000640440 TCF7L2Q9NQB0 619 aa12.75□□□□□ -0.37
HNRNPU-229ENST00000640440 ZNF446Q9NWS9 450 aa12.75□□□□□ -0.37
HNRNPU-229ENST00000640440 CALML5Q9NZT1 146 aa12.75□□□□□ -0.37
HNRNPU-229ENST00000640440 DSPPQ9NZW4 1301 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 IGKV3D-15A0A087WSY6 115 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 CDHR4A6H8M9 788 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 ZNF716A6NP11 495 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 FAAHO00519 579 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 CLOCKO15516 846 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 DNPH1O43598 174 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 RAMP1O60894 148 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 IGHV3-9P01782 118 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 TFPTP0C1Z6 253 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 GKN3PP0CG01 181 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 IGHV1-2P23083 117 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 FKBP2P26885 142 aaKnown RBP12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 SLC1A3P43003 542 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 CLK1P49759 484 aaKnown RBP12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 PDK3Q15120 406 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 TTMPQ5BVD1 217 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 SLC2A7Q6PXP3 512 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 ATG4DQ86TL0 474 aaPredicted RBP12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 CCDC103Q8IW40 242 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 ZNF440Q8IYI8 595 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 OR52P1PQ8NH57 321 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 AKAP1Q92667 903 aaKnown RBP eCLIP12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 GTF2H4Q92759 462 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 DDIT4LQ96D03 193 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 TMEM19Q96HH6 336 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 EBF4Q9BQW3 602 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 NGBQ9NPG2 151 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 TMEM181Q9P2C4 612 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 ZNF443Q9Y2A4 671 aaPredicted RBP12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 NOSIPQ9Y314 301 aaKnown RBP12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 RNF115Q9Y4L5 304 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 PCDHB14Q9Y5E9 798 aa12.74□□□□□ -0.37
HNRNPU-229ENST00000640440 ZC3H12DA2A288 527 aaKnown RBP12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 TMEM247A6NEH6 219 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 NR5A2O00482 541 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 ZNF208O43345 1280 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 CNOT4O95628 575 aaKnown RBP12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 CD3EP07766 207 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 NUDT7P0C024 238 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 IMPDH2P12268 514 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 COX5AP20674 150 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 PTH2RP49190 550 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 IDH3AP50213 366 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 SLC35A1P78382 337 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 NCMAPQ5T1S8 102 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 RNF220Q5VTB9 566 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 SEZ6L2Q6UXD5 910 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 YTHDF3Q7Z739 585 aaKnown RBP12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 UBE2J2Q8N2K1 259 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 CADM2Q8N3J6 435 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 APH1AQ96BI3 265 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 C18orf12Q96KH6 178 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 SMR3AQ99954 134 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 PAIP1Q9H074 479 aaKnown RBP12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 ESRP2Q9H6T0 727 aaKnown RBP12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 CACYBPQ9HB71 228 aaKnown RBP12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 TRAPPC4Q9Y296 219 aa12.73□□□□□ -0.37
HNRNPU-229ENST00000640440 RTTNQ86VV8 2226 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 HMGB1P1B2RPK0 211 aaPredicted RBP12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 CLIC1O00299 241 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 GPR171O14626 319 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 RAD51DO75771 328 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 TGDSO95455 350 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 INHBBP09529 407 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 ADSLP30566 484 aaPredicted RBP12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 ACAA2P42765 397 aaKnown RBP12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 MRPL19P49406 292 aaKnown RBP12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 SLC16A1P53985 500 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 COPZ1P61923 177 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 BSPH1Q075Z2 132 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 LARS2Q15031 903 aaKnown RBP12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 PPA1Q15181 289 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 RGNQ15493 299 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 FBXW9Q5XUX1 488 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 CLIP4Q8N3C7 705 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 ZNF433Q8N7K0 673 aaPredicted RBP12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 ZNF611Q8N823 705 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 TMEM171Q8WVE6 324 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 DYDC1Q8WWB3 177 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 IGFBPL1Q8WX77 278 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 MAL2Q969L2 176 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 Q96MF0 132 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 USB1Q9BQ65 265 aaKnown RBP12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 NAA11Q9BSU3 229 aaPredicted RBP12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 GSX2Q9BZM3 304 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 RAD21L1Q9H4I0 556 aa12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 THUMPD1Q9NXG2 353 aaKnown RBP12.72□□□□□ -0.37
HNRNPU-229ENST00000640440 ARFGEF3Q5TH69 2177 aa12.71□□□□□ -0.37
HNRNPU-229ENST00000640440 A0A096LPI6 279 aa12.71□□□□□ -0.37
HNRNPU-229ENST00000640440 A0A0G2JPF8 293 aa12.71□□□□□ -0.37
HNRNPU-229ENST00000640440 HNRNPCL2B2RXH8 293 aa12.71□□□□□ -0.37
HNRNPU-229ENST00000640440 HNRNPCL3B7ZW38 293 aa12.71□□□□□ -0.37
HNRNPU-229ENST00000640440 EIF1BO60739 113 aaKnown RBP12.71□□□□□ -0.37
HNRNPU-229ENST00000640440 HNRNPCL1O60812 293 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms