RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 FAHD2AQ96GK7 314 aa2.59□□□□□ -1.99
CCDC7-216ENST00000640058 CELF6Q96J87 481 aaKnown RBP2.59□□□□□ -1.99
CCDC7-216ENST00000640058 OR5B2Q96R09 309 aa2.59□□□□□ -1.99
CCDC7-216ENST00000640058 ANGPTL2Q9UKU9 493 aa2.59□□□□□ -1.99
CCDC7-216ENST00000640058 NEUROG3Q9Y4Z2 214 aa2.59□□□□□ -1.99
CCDC7-216ENST00000640058 MUC19Q7Z5P9 8384 aa2.59□□□□□ -2
CCDC7-216ENST00000640058 IGKV1D-17A0A075B6S4 117 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 IGHV3-64DA0A0J9YX35 117 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 MBLAC1A4D2B0 266 aaPredicted RBP2.58□□□□□ -2
CCDC7-216ENST00000640058 OR6C65A6NJZ3 312 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 H3BMQ9 156 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 GFYI3L273 518 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 BTN3A3O00478 584 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 OR1F1O43749 312 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 FAM189A1O60320 539 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 KIAA0754O94854 1291 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 TBPP20226 339 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 MAGEA5P43359 124 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 PPT1P50897 306 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 ZNF136P52737 540 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 PLA2G16P53816 162 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 EWSR1Q01844 656 aaKnown RBP eCLIP2.58□□□□□ -2
CCDC7-216ENST00000640058 RAB40BQ12829 278 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 SNTB2Q13425 540 aaKnown RBP2.58□□□□□ -2
CCDC7-216ENST00000640058 TATDN3Q17R31 274 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 CCDC57Q2TAC2 916 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 LIPNQ5VXI9 398 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 LYPD1Q8N2G4 141 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 SLC22A8Q8TCC7 542 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 THRSPQ92748 146 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 TRIM44Q96DX7 344 aaPredicted RBP2.58□□□□□ -2
CCDC7-216ENST00000640058 FAM210BQ96KR6 192 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 FOPNLQ96NB1 174 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 PELOQ9BRX2 385 aaKnown RBP2.58□□□□□ -2
CCDC7-216ENST00000640058 ALG12Q9BV10 488 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 CRNKL1Q9BZJ0 848 aaKnown RBP2.58□□□□□ -2
CCDC7-216ENST00000640058 POLR1EQ9GZS1 481 aaKnown RBP2.58□□□□□ -2
CCDC7-216ENST00000640058 RMND5AQ9H871 391 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 C6orf203Q9P0P8 240 aaPredicted RBP2.58□□□□□ -2
CCDC7-216ENST00000640058 ERVW-1Q9UQF0 538 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 RASD1Q9Y272 281 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 MAP3K15Q6ZN16 1313 aa2.58□□□□□ -2
CCDC7-216ENST00000640058 A8MUI8 341 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 C11orf94C9JXX5 98 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 BCAS1O75363 584 aaPredicted RBP2.57□□□□□ -2
CCDC7-216ENST00000640058 SPAG6O75602 509 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 TM7SF2O76062 418 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 MOSP00540 346 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 GIPP09681 153 aaPredicted RBP2.57□□□□□ -2
CCDC7-216ENST00000640058 H2BFMP0C1H6 154 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 ADRB3P13945 408 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 NMT1P30419 496 aaKnown RBP2.57□□□□□ -2
CCDC7-216ENST00000640058 PJVKQ0ZLH3 352 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 SELPLGQ14242 412 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 PDK4Q16654 411 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 NDUFA9Q16795 377 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 USH1GQ495M9 461 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 PNKDQ8N490 385 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 CLDN19Q8N6F1 224 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 ARL6IP6Q8N6S5 226 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 DENND6BQ8NEG7 585 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 PAQR8Q8TEZ7 354 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 AENQ8WTP8 325 aaKnown RBP2.57□□□□□ -2
CCDC7-216ENST00000640058 C12orf66Q96MD2 445 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 SLC6A7Q99884 636 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 OMDQ99983 421 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 HDHD3Q9BSH5 251 aaPredicted RBP2.57□□□□□ -2
CCDC7-216ENST00000640058 SLC25A22Q9H936 323 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 B3GNT2Q9NY97 397 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 RBAKQ9NYW8 714 aaPredicted RBP2.57□□□□□ -2
CCDC7-216ENST00000640058 GNG12Q9UBI6 72 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 OR10H1Q9Y4A9 318 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 OARD1Q9Y530 152 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 FRMPD4Q14CM0 1322 aa2.57□□□□□ -2
CCDC7-216ENST00000640058 A0A0G2JRQ6 117 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 SULT2B1O00204 365 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 MSH4O15457 936 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 TNFSF13O75888 250 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 SLITRK3O94933 977 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 CYP2B6P20813 491 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 UQCRC2P22695 453 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 RGS4P49798 205 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 AP3M2P53677 418 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 CCDC173Q0VFZ6 552 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 C1orf146Q5VVC0 180 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 FAM199XQ6PEV8 388 aaPredicted RBP2.56□□□□□ -2
CCDC7-216ENST00000640058 APTXQ7Z2E3 356 aaKnown RBP2.56□□□□□ -2
CCDC7-216ENST00000640058 LRRC43Q8N309 656 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 FAM133AQ8N9E0 248 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 DUSP18Q8NEJ0 188 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 OR2T3Q8NH03 318 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 RIT2Q99578 217 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 ERP44Q9BS26 406 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 TMEM117Q9H0C3 514 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 SIGLEC8Q9NYZ4 499 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 TREM2Q9NZC2 230 aa2.56□□□□□ -2
CCDC7-216ENST00000640058 NUFIP1Q9UHK0 495 aaKnown RBP2.56□□□□□ -2
CCDC7-216ENST00000640058 DDX49Q9Y6V7 483 aaKnown RBP2.56□□□□□ -2
CCDC7-216ENST00000640058 A0A1B0GWB2 263 aa2.55□□□□□ -2
CCDC7-216ENST00000640058 TMEM150BA6NC51 233 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms