RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 ALDOBP05062 364 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 INHBAP08476 426 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 OR4A8P0C604 315 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 PRR23D2P0DMB1 279 aaPredicted RBP2.87□□□□□ -1.95
CCDC7-213ENST00000639290 IGHV4-38-2P0DP08 117 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 SERPINB6P35237 376 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 OR3A2P47893 321 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 PCP4P48539 62 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 CAPZA1P52907 286 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 STX1BP61266 288 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 KCNJ10P78508 379 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 DUSP2Q05923 314 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 SPOCK1Q08629 439 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 CETN1Q12798 172 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 PCGF3Q3KNV8 242 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 GPR33Q49SQ1 333 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 C9orf66Q5T8R8 295 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 TMEM200BQ69YZ2 307 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 ETFRF1Q6IPR1 90 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 BTNL3Q6UXE8 466 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 ADCK2Q7Z695 626 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 WFDC3Q8IUB2 231 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 LRRC56Q8IYG6 542 aaPredicted RBP2.87□□□□□ -1.95
CCDC7-213ENST00000639290 SLC22A15Q8IZD6 547 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 FAM185AQ8N0U4 392 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 ZNF398Q8TD17 642 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 FRZBQ92765 325 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 RNFT2Q96EX2 444 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 WDFY2Q96P53 400 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 PINK1Q9BXM7 581 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 SH3BP4Q9P0V3 963 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 OR5V1Q9UGF6 321 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 PCSK1NQ9UHG2 260 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 PCYOX1Q9UHG3 505 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 RCE1Q9Y256 329 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 NAALAD2Q9Y3Q0 740 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 SRRM2Q9UQ35 2752 aaKnown RBP2.87□□□□□ -1.95
CCDC7-213ENST00000639290 C16orf90A8MZG2 172 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 BOLA2-SMG1P6H3BVE0 249 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 CD3EAPO15446 510 aaKnown RBP2.87□□□□□ -1.95
CCDC7-213ENST00000639290 SYNGR3O43761 229 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 TPPPO94811 219 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 OXSR1O95747 527 aaPredicted RBP2.87□□□□□ -1.95
CCDC7-213ENST00000639290 LSM8O95777 96 aaKnown RBP2.87□□□□□ -1.95
CCDC7-213ENST00000639290 FRMD6-AS1P0C7T7 363 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 CYP11B1P15538 503 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 NPR2P20594 1047 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 TCEA1P23193 301 aaKnown RBP2.87□□□□□ -1.95
CCDC7-213ENST00000639290 PDHA2P29803 388 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 STAT6P42226 847 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 HNMTP50135 292 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 PTTG1IPP53801 180 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 GSTA3Q16772 222 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 MRGPRG-AS1Q2M3A8 158 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 PDSS1Q5T2R2 415 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 CCDC183Q5T5S1 534 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 CEMP1Q6PRD7 247 aaPredicted RBP2.87□□□□□ -1.95
CCDC7-213ENST00000639290 ANGPTL8Q6UXH0 198 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 NUDT13Q86X67 352 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 ATPAF2Q8N5M1 289 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 NPEPL1Q8NDH3 523 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 C8orf46Q8TAG6 207 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 NPRL2Q8WTW4 380 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 ITLN1Q8WWA0 313 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 SMPDL3AQ92484 453 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 ARL5BQ96KC2 179 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 KLHL15Q96M94 604 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 HIST1H2AAQ96QV6 131 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 COPS8Q99627 209 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 KCNS3Q9BQ31 491 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 PRRG4Q9BZD6 226 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 NCOR1P1Q9H4R4 102 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 NDE1Q9NXR1 346 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 NTMQ9P121 344 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 STOX2Q9P2F5 926 aaPredicted RBP2.87□□□□□ -1.95
CCDC7-213ENST00000639290 KLHL13Q9P2N7 655 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 FBXL17Q9UF56 701 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 CLDN16Q9Y5I7 305 aa2.87□□□□□ -1.95
CCDC7-213ENST00000639290 MDFIC2A0A1B0GVS7 189 aa2.86□□□□□ -1.95
CCDC7-213ENST00000639290 A0A1W2PPV9 198 aa2.86□□□□□ -1.95
CCDC7-213ENST00000639290 CLDN25C9JDP6 229 aa2.86□□□□□ -1.95
CCDC7-213ENST00000639290 M0R1B8 84 aa2.86□□□□□ -1.95
CCDC7-213ENST00000639290 EEF2KO00418 725 aaKnown RBP2.86□□□□□ -1.95
CCDC7-213ENST00000639290 FBP2O00757 339 aa2.86□□□□□ -1.95
CCDC7-213ENST00000639290 PAGE4O60829 102 aa2.86□□□□□ -1.95
CCDC7-213ENST00000639290 DEDDO75618 318 aa2.86□□□□□ -1.95
CCDC7-213ENST00000639290 AGTP01019 485 aa2.86□□□□□ -1.95
CCDC7-213ENST00000639290 IFNB1P01574 187 aa2.86□□□□□ -1.95
CCDC7-213ENST00000639290 SLC35G6P0C7Q6 338 aa2.86□□□□□ -1.95
CCDC7-213ENST00000639290 NT5EP21589 574 aa2.86□□□□□ -1.95
CCDC7-213ENST00000639290 TIA1P31483 386 aaKnown RBP eCLIP2.86□□□□□ -1.95
CCDC7-213ENST00000639290 THBS4P35443 961 aa2.86□□□□□ -1.95
CCDC7-213ENST00000639290 ZNF83P51522 516 aa2.86□□□□□ -1.95
CCDC7-213ENST00000639290 CCZ1BP86790 482 aa2.86□□□□□ -1.95
CCDC7-213ENST00000639290 CCZ1P86791 482 aaPredicted RBP2.86□□□□□ -1.95
CCDC7-213ENST00000639290 EFNB1P98172 346 aa2.86□□□□□ -1.95
CCDC7-213ENST00000639290 PRDX1Q06830 199 aaKnown RBP2.86□□□□□ -1.95
CCDC7-213ENST00000639290 CSTF3Q12996 717 aaKnown RBP2.86□□□□□ -1.95
CCDC7-213ENST00000639290 RUNDC3AQ59EK9 446 aa2.86□□□□□ -1.95
CCDC7-213ENST00000639290 SLC35E4Q6ICL7 350 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms