RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 TYRP1P17643 537 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 MAT2AP31153 395 aaKnown RBP18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 RPS11P62280 158 aaKnown RBP eCLIP18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 CLLU1Q5K131 121 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 HDDC2Q7Z4H3 204 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 UBE2Q1Q7Z7E8 422 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 SLITRK4Q8IW52 837 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 OR52E2Q8NGJ4 325 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 ZNF671Q8TAW3 534 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 PHYHIPQ92561 330 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 GDE1Q9NZC3 331 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 CHRNA9Q9UGM1 479 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 SCP2D1Q9UJQ7 156 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 ICAM5Q9UMF0 924 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 RPS10-NUDT3A0A1W2PQS6 291 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 GXYLT2A0PJZ3 443 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 IFNA7P01567 189 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 WNT1P04628 370 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 ANKRD34CP0C6C1 535 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 VEGFBP49765 207 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 EXOSC7Q15024 291 aaKnown RBP18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 ESPNLQ6ZVH7 1005 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 GRAMD2AQ8IUY3 354 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 FAM98AQ8NCA5 519 aaKnown RBP18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 RADILQ96JH8 1075 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 TTTY10Q9BZA0 68 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 TRIM2Q9C040 744 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 IL21RQ9HBE5 538 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 DLL4Q9NR61 685 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 PILRAQ9UKJ1 303 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 PCDHGA9Q9Y5G4 932 aaKnown RBP18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 UBL4AP11441 157 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 DNASE1P24855 282 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 GDNFP39905 211 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 HCCSP53701 268 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 MGAT2Q10469 447 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 SNTA1Q13424 505 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 FAM69AQ5T7M9 428 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 FCRL6Q6DN72 434 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 FIGLAQ6QHK4 219 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 LSMEM1Q8N8F7 131 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 LGALS14Q8TCE9 139 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 DACT3Q96B18 629 aaPredicted RBP18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 ARSGQ96EG1 525 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 TWSG1Q9GZX9 223 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 AKAP7Q9P0M2 348 aaPredicted RBP18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 AK6Q9Y3D8 172 aaKnown RBP18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 NPTNQ9Y639 398 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 TRBV2A0A0J9YWF9 115 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 ZNF879B4DU55 563 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 I3L521 148 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 SSNA1O43805 119 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 ITGA10O75578 1167 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 NGFRP08138 427 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 AK4P27144 223 aaPredicted RBP18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 LGALSLQ3ZCW2 172 aaPredicted RBP18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 ZAR1Q86SH2 424 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 SLC35F2Q8IXU6 374 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 PIAS4Q8N2W9 510 aaPredicted RBP18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 ARL14Q8N4G2 192 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 SDR9C7Q8NEX9 313 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 SNX33Q8WV41 574 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 FAM131CQ96AQ9 280 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 OR14A2Q96R54 314 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 C20orf85Q9H1P6 137 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 CLEC4MQ9H2X3 399 aaPredicted RBP18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 C12orf10Q9HB07 376 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 PCOLCE2Q9UKZ9 415 aa18.51■□□□□ 0.55
SYNGAP1-227ENST00000638142 SLC31A1O15431 190 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 PEX14O75381 377 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 NKX2-2O95096 273 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 SYPP08247 313 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 ENPP1P22413 925 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 CRYZQ08257 329 aaKnown RBP18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 GRK1Q15835 563 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 ALG10BQ5I7T1 473 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 UNQ9370/PRO34162Q6UXP9 181 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 ZNF527Q8NB42 609 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 TMEM52Q8NDY8 209 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 OR4K13Q8NH42 304 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 NXPE2Q96DL1 559 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 MRPL48Q96GC5 212 aaKnown RBP18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 PTCHD1Q96NR3 888 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 PLEKHA1Q9HB21 404 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 A0A1B0GTQ1 180 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 CYR61O00622 381 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 MAGEB4O15481 346 aaPredicted RBP18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 GPRIN2O60269 458 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 OR7A10O76100 309 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 NDUFB2O95178 105 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 HIST1H1CP16403 213 aaKnown RBP18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 ACAA2P42765 397 aaKnown RBP18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 ADPRHP54922 357 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 KIAA1024LP59773 190 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 LGALS3BPQ08380 585 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 PRRT3Q5FWE3 981 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 PRSS45Q7RTY3 260 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 SLC51BQ86UW2 128 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 ZNF614Q8N883 585 aa18.5■□□□□ 0.55
SYNGAP1-227ENST00000638142 BEST4Q8NFU0 473 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms