RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 COPZ1P61923 177 aa14.85□□□□□ -0.03
CACNA1A-259ENST00000638114 PDK3Q15120 406 aa14.85□□□□□ -0.03
CACNA1A-259ENST00000638114 ACKR1Q16570 336 aa14.85□□□□□ -0.03
CACNA1A-259ENST00000638114 PAGE3Q5JUK9 113 aa14.85□□□□□ -0.03
CACNA1A-259ENST00000638114 LRIF1Q5T3J3 769 aa14.85□□□□□ -0.03
CACNA1A-259ENST00000638114 Q6ZT83 130 aa14.85□□□□□ -0.03
CACNA1A-259ENST00000638114 MSRB3Q8IXL7 192 aa14.85□□□□□ -0.03
CACNA1A-259ENST00000638114 CLIP4Q8N3C7 705 aa14.85□□□□□ -0.03
CACNA1A-259ENST00000638114 PLPPR2Q96GM1 343 aa14.85□□□□□ -0.03
CACNA1A-259ENST00000638114 SPATA9Q9BWV2 254 aa14.85□□□□□ -0.03
CACNA1A-259ENST00000638114 ARMC7Q9H6L4 198 aa14.85□□□□□ -0.03
CACNA1A-259ENST00000638114 SLAMF8Q9P0V8 285 aa14.85□□□□□ -0.03
CACNA1A-259ENST00000638114 TRAPPC4Q9Y296 219 aa14.85□□□□□ -0.03
CACNA1A-259ENST00000638114 NOSIPQ9Y314 301 aaKnown RBP14.85□□□□□ -0.03
CACNA1A-259ENST00000638114 IFT52Q9Y366 437 aa14.85□□□□□ -0.03
CACNA1A-259ENST00000638114 ROS1P08922 2347 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 IGKV3D-15A0A087WSY6 115 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 ZC3H12DA2A288 527 aaKnown RBP14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 ZNF716A6NP11 495 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 LYZL6O75951 148 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 SASH3O75995 380 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 IMPDH2P12268 514 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 BMP2P12643 396 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 NCF2P19878 526 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 CXCR1P25024 350 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 ACAA2P42765 397 aaKnown RBP14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 MAP2K6P52564 334 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 ADAM8P78325 824 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 SLC35A1P78382 337 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 IRX1P78414 480 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 FOXD4Q12950 439 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 ZSWIM7Q19AV6 140 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 ZNF311Q5JNZ3 666 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 GCNT6Q5T4J0 391 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 PRAMEF8Q5VWM4 474 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 PRAMEF7Q5VXH5 474 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 WBP2NLQ6ICG8 309 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 ZNF704Q6ZNC4 412 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 BHLHA15Q7RTS1 189 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 CCDC103Q8IW40 242 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 BBS10Q8TAM1 723 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 CCL19Q99731 98 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 NAA11Q9BSU3 229 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 TMUB1Q9BVT8 246 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 ADAM19Q9H013 955 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 SLC52A3Q9NQ40 469 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 TMEM45AQ9NWC5 275 aa14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-259ENST00000638114 GPR171O14626 319 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 EIF1BO60739 113 aaKnown RBP14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 RAMP1O60894 148 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 PGM3O95394 542 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 IGHV3-9P01782 118 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 PRG2P13727 222 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 PPIBP23284 216 aaKnown RBP14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 IDUAP35475 653 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 CAPRIN1Q14444 709 aaKnown RBP14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 TAB1Q15750 504 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 C20orf204Q6ZNR8 217 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 SERPINA11Q86U17 422 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 UBE2J2Q8N2K1 259 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 NFKBIDQ8NI38 313 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 HSD17B8Q92506 261 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 PIGTQ969N2 578 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 APH1AQ96BI3 265 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 USB1Q9BQ65 265 aaKnown RBP14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 POTEKPQ9BYX7 375 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 RABEP2Q9H5N1 569 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 BCL2L10Q9HD36 194 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 NPHS2Q9NP85 383 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 NGBQ9NPG2 151 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 VAPAQ9P0L0 249 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 DCTN4Q9UJW0 460 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 CHST2Q9Y4C5 530 aa14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 FLNAP21333 2647 aaKnown RBP14.83□□□□□ -0.04
CACNA1A-259ENST00000638114 ACANP16112 2415 aa14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 DSCAMO60469 2012 aa14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 A0A1W2PP18 115 aa14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 FRS3O43559 492 aa14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 EDF1O60869 148 aaKnown RBP14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 SMPD2O60906 423 aa14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 CNOT4O95628 575 aaKnown RBP14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 PLAUP00749 431 aa14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 ARAFP10398 606 aa14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 IGHV1-2P23083 117 aa14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 SLC16A1P53985 500 aa14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 NKX6-1P78426 367 aaPredicted RBP14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 BNIP2Q12982 314 aa14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 STK11Q15831 433 aa14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 WFDC11Q8NEX6 87 aa14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 STON2Q8WXE9 905 aa14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 PIP5K1AQ99755 562 aa14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 PRDM4Q9UKN5 801 aa14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 TRIM33Q9UPN9 1127 aa14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 RAI1Q7Z5J4 1906 aaPredicted RBP14.82□□□□□ -0.04
CACNA1A-259ENST00000638114 TRBV5-3A0A0A0MS03 114 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 EVPLLA8MZ36 301 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 MRPL33O75394 65 aaKnown RBP14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 GPIP06744 558 aa14.81□□□□□ -0.04
CACNA1A-259ENST00000638114 ETS2P15036 469 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms