RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 OR9I1Q8NGQ6 314 aa16.79■□□□□ 0.28
CLN6-221ENST00000637494 AKAP1Q92667 903 aaKnown RBP eCLIP16.79■□□□□ 0.28
CLN6-221ENST00000637494 DNAJA3Q96EY1 480 aa16.79■□□□□ 0.28
CLN6-221ENST00000637494 SLC6A13Q9NSD5 602 aa16.79■□□□□ 0.28
CLN6-221ENST00000637494 PARPBPQ9NWS1 579 aa16.79■□□□□ 0.28
CLN6-221ENST00000637494 CIB4A0PJX0 185 aa16.78■□□□□ 0.28
CLN6-221ENST00000637494 TMEM72A0PK05 275 aa16.78■□□□□ 0.28
CLN6-221ENST00000637494 CDHR4A6H8M9 788 aa16.78■□□□□ 0.28
CLN6-221ENST00000637494 FAM171A2A8MVW0 826 aa16.78■□□□□ 0.28
CLN6-221ENST00000637494 C5orf58C9J3I9 102 aa16.78■□□□□ 0.28
CLN6-221ENST00000637494 PLAUP00749 431 aa16.78■□□□□ 0.28
CLN6-221ENST00000637494 TFPTP0C1Z6 253 aa16.78■□□□□ 0.28
CLN6-221ENST00000637494 PPA1Q15181 289 aa16.78■□□□□ 0.28
CLN6-221ENST00000637494 NCMAPQ5T1S8 102 aa16.78■□□□□ 0.28
CLN6-221ENST00000637494 FBXW9Q5XUX1 488 aa16.78■□□□□ 0.28
CLN6-221ENST00000637494 ZNF836Q6ZNA1 936 aa16.78■□□□□ 0.28
CLN6-221ENST00000637494 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.78■□□□□ 0.28
CLN6-221ENST00000637494 YTHDF3Q7Z739 585 aaKnown RBP16.78■□□□□ 0.28
CLN6-221ENST00000637494 VRK2Q86Y07 508 aa16.78■□□□□ 0.28
CLN6-221ENST00000637494 CADM2Q8N3J6 435 aa16.78■□□□□ 0.28
CLN6-221ENST00000637494 SLC38A5Q8WUX1 472 aa16.78■□□□□ 0.28
CLN6-221ENST00000637494 AURKBQ96GD4 344 aaPredicted RBP16.78■□□□□ 0.28
CLN6-221ENST00000637494 TMEM19Q96HH6 336 aa16.78■□□□□ 0.28
CLN6-221ENST00000637494 TMEM204Q9BSN7 226 aa16.78■□□□□ 0.28
CLN6-221ENST00000637494 BDH2Q9BUT1 245 aa16.78■□□□□ 0.28
CLN6-221ENST00000637494 ZNF443Q9Y2A4 671 aaPredicted RBP16.78■□□□□ 0.28
CLN6-221ENST00000637494 DSPPQ9NZW4 1301 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 CCT8L1PA6NM43 557 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 ZNF716A6NP11 495 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 CLIC1O00299 241 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 ADAM11O75078 769 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 GPIP06744 558 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 THBS1P07996 1170 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 INHBBP09529 407 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 IDUAP35475 653 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 MVDP53602 400 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 SLC16A1P53985 500 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 IRX1P78414 480 aaPredicted RBP16.77■□□□□ 0.28
CLN6-221ENST00000637494 PLAURQ03405 335 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 FADDQ13158 208 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 GTDC1Q4AE62 458 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 TIMM23BQ5SRD1 257 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 RNF220Q5VTB9 566 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 WBP2NLQ6ICG8 309 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 ADAM5Q6NVV9 412 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 GTF2H4Q92759 462 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 FBXW5Q969U6 566 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 Q96MF0 132 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 CCDC28BQ9BUN5 200 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 SPATA9Q9BWV2 254 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 TAPBPLQ9BX59 468 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 GSX2Q9BZM3 304 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 RLIMQ9NVW2 624 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 ARGLU1Q9NWB6 273 aaPredicted RBP16.77■□□□□ 0.28
CLN6-221ENST00000637494 ASB6Q9NWX5 421 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 SLC9A8Q9Y2E8 581 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 PCDHB14Q9Y5E9 798 aa16.77■□□□□ 0.28
CLN6-221ENST00000637494 A0A096LPI6 279 aa16.76■□□□□ 0.27
CLN6-221ENST00000637494 GKN3PP0CG01 181 aa16.76■□□□□ 0.27
CLN6-221ENST00000637494 COX5AP20674 150 aa16.76■□□□□ 0.27
CLN6-221ENST00000637494 IGHV1-2P23083 117 aa16.76■□□□□ 0.27
CLN6-221ENST00000637494 PPIBP23284 216 aaKnown RBP16.76■□□□□ 0.27
CLN6-221ENST00000637494 PTH2RP49190 550 aa16.76■□□□□ 0.27
CLN6-221ENST00000637494 MRPL19P49406 292 aaKnown RBP16.76■□□□□ 0.27
CLN6-221ENST00000637494 RPS4XP62701 263 aaKnown RBP16.76■□□□□ 0.27
CLN6-221ENST00000637494 RGNQ15493 299 aa16.76■□□□□ 0.27
CLN6-221ENST00000637494 ZNF311Q5JNZ3 666 aa16.76■□□□□ 0.27
CLN6-221ENST00000637494 PRAMEF8Q5VWM4 474 aa16.76■□□□□ 0.27
CLN6-221ENST00000637494 PRAMEF7Q5VXH5 474 aa16.76■□□□□ 0.27
CLN6-221ENST00000637494 SLC2A7Q6PXP3 512 aa16.76■□□□□ 0.27
CLN6-221ENST00000637494 CASP12Q6UXS9 341 aa16.76■□□□□ 0.27
CLN6-221ENST00000637494 KRTAP1-3Q8IUG1 177 aa16.76■□□□□ 0.27
CLN6-221ENST00000637494 CCDC103Q8IW40 242 aa16.76■□□□□ 0.27
CLN6-221ENST00000637494 BBS10Q8TAM1 723 aa16.76■□□□□ 0.27
CLN6-221ENST00000637494 ADAM19Q9H013 955 aa16.76■□□□□ 0.27
CLN6-221ENST00000637494 UPB1Q9UBR1 384 aa16.76■□□□□ 0.27
CLN6-221ENST00000637494 NR5A2O00482 541 aa16.75■□□□□ 0.27
CLN6-221ENST00000637494 IGHV3-9P01782 118 aa16.75■□□□□ 0.27
CLN6-221ENST00000637494 IDH3AP50213 366 aa16.75■□□□□ 0.27
CLN6-221ENST00000637494 AQP5P55064 265 aa16.75■□□□□ 0.27
CLN6-221ENST00000637494 MAPK11Q15759 364 aa16.75■□□□□ 0.27
CLN6-221ENST00000637494 RPS26P11Q5JNZ5 115 aaPredicted RBP16.75■□□□□ 0.27
CLN6-221ENST00000637494 OTUD3Q5T2D3 398 aaPredicted RBP16.75■□□□□ 0.27
CLN6-221ENST00000637494 OR7E24Q6IFN5 339 aa16.75■□□□□ 0.27
CLN6-221ENST00000637494 PAQR6Q6TCH4 344 aa16.75■□□□□ 0.27
CLN6-221ENST00000637494 HDXQ7Z353 690 aa16.75■□□□□ 0.27
CLN6-221ENST00000637494 ZNF433Q8N7K0 673 aaPredicted RBP16.75■□□□□ 0.27
CLN6-221ENST00000637494 TRMT61AQ96FX7 289 aaKnown RBP16.75■□□□□ 0.27
CLN6-221ENST00000637494 PAIP1Q9H074 479 aaKnown RBP16.75■□□□□ 0.27
CLN6-221ENST00000637494 GSX1Q9H4S2 264 aaPredicted RBP16.75■□□□□ 0.27
CLN6-221ENST00000637494 A4GALTQ9NPC4 353 aa16.75■□□□□ 0.27
CLN6-221ENST00000637494 SLCO1B3Q9NPD5 702 aa16.75■□□□□ 0.27
CLN6-221ENST00000637494 INTS9Q9NV88 658 aaKnown RBP16.75■□□□□ 0.27
CLN6-221ENST00000637494 TAS2R16Q9NYV7 291 aa16.75■□□□□ 0.27
CLN6-221ENST00000637494 CCDC167Q9P0B6 97 aa16.75■□□□□ 0.27
CLN6-221ENST00000637494 LAMP3Q9UQV4 416 aa16.75■□□□□ 0.27
CLN6-221ENST00000637494 A0A1W2PP18 115 aa16.74■□□□□ 0.27
CLN6-221ENST00000637494 OR5H1A6NKK0 313 aa16.74■□□□□ 0.27
CLN6-221ENST00000637494 A8MVM7 634 aa16.74■□□□□ 0.27
CLN6-221ENST00000637494 HMGB1P1B2RPK0 211 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms