RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 ZNF37AP17032 561 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 KITLGP21583 273 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 BCKDHBP21953 392 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 AMPD1P23109 780 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 CNR2P34972 360 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 GYG1P46976 350 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 SOX2P48431 317 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 AESQ08117 197 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 TPBGQ13641 420 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 MESDQ14696 234 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 PSG5Q15238 335 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 INPP5JQ15735 1006 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 TOMM34Q15785 309 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 NKPD1Q17RQ9 610 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 TRIM16LQ309B1 348 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 ARL13AQ5H913 290 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 GCSAMLQ5JQS6 135 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 NKAPLQ5M9Q1 402 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 SAMD4BQ5PRF9 694 aaKnown RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 CCNJQ5T5M9 372 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 PXDC1Q5TGL8 231 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 CYB5R2Q6BCY4 276 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 SPESP1Q6UW49 350 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 C17orf107Q6ZR85 190 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 SLC16A12Q6ZSM3 486 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 CPEB2Q7Z5Q1 589 aaKnown RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 SPRED2Q7Z698 418 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 ZNF761Q86XN6 746 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 CROCCP3Q8IVE0 287 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 NPEPL1Q8NDH3 523 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 ZNF738Q8NE65 137 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 OR5M3Q8NGP4 307 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 TFGQ92734 400 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 NSL1Q96IY1 281 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 FAM210BQ96KR6 192 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 CAPNS2Q96L46 248 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 ZNF582Q96NG8 517 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 FRG2BQ96QU4 278 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 TMEM209Q96SK2 561 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 RBBP8Q99708 897 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 TMEM109Q9BVC6 243 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 TIPINQ9BVW5 301 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 OSBPL1AQ9BXW6 950 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 BEX2Q9BXY8 128 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 ZNF717Q9BY31 904 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 KRTAP4-9Q9BYQ8 210 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 LRRC2Q9BYS8 371 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 SYT4Q9H2B2 425 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 ANKRD19PQ9H560 264 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 PRDM7Q9NQW5 492 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 SLC2A4RGQ9NR83 387 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 CCDC59Q9P031 241 aaKnown RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 MIOXQ9UGB7 285 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 B3GALT5Q9Y2C3 310 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 NDUFAF1Q9Y375 327 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 RBM8AQ9Y5S9 174 aaKnown RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 TRAV24A0A0B4J272 114 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 A0A1W2PQD8 194 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 C2CD4BA6NLJ0 364 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 NEURL1BA8MQ27 555 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 TMEM150CB9EJG8 249 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 C9J4A7 227 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 G3V3Y1 287 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 H3BS24 57 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 hCG_2039718K7EN88 272 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 PPP1R2P9O14990 202 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 TM9SF1O15321 606 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 NUPL2O15504 423 aaKnown RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 SRPX2O60687 465 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 SLC19A2O60779 497 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 SRP72O76094 671 aaKnown RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 CTDNEP1O95476 244 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 CLDN9O95484 217 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 SERPINA1P01009 418 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 EPOP01588 193 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 IFNW1P05000 195 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 ATP1A1P05023 1023 aaKnown RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 PRF1P14222 555 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 HRH2P25021 359 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 DUSP1P28562 367 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 CD1CP29017 333 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 RFX3P48380 749 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 NOVA1P51513 510 aaKnown RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 PGGT1BP53609 377 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 GRB7Q14451 532 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 IDNKQ5T6J7 187 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 AGAP7PQ5VUJ5 663 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 ANKRD34AQ69YU3 496 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 SFRP4Q6FHJ7 346 aaPredicted RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 EMBQ6PCB8 327 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 CEACAM20Q6UY09 585 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 Q6ZSR3 168 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 ASB18Q6ZVZ8 466 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 WDR17Q8IZU2 1322 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 TAF1LQ8IZX4 1826 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 OR4K2Q8NGD2 314 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 PPWD1Q96BP3 646 aaKnown RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 SGTBQ96EQ0 304 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 AGAP4Q96P64 663 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 FMO2Q99518 471 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms