RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 SLC7A6Q92536 515 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 PTP4A1Q93096 173 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 MSANTD3Q96H12 275 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 PGLYRP3Q96LB9 341 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 HSPA12BQ96MM6 686 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 HS6ST2Q96MM7 605 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 MARVELD1Q9BSK0 173 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 WACQ9BTA9 647 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 OR52D1Q9H346 318 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 SMOC1Q9H4F8 434 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 POT1Q9NUX5 634 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 PAQR5Q9NXK6 330 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 TNFRSF10DQ9UBN6 386 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 CPAMD8Q8IZJ3 1885 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 EML5Q05BV3 1969 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 A0A1W2PPK0 400 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 BLACEA4D250 179 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 A6NLC8 198 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 GALR3O60755 368 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 MTRF1O75570 445 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 REM1O75628 298 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 RGS9O75916 674 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 LSSP48449 732 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 CLDN20P56880 219 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 SRP54P61011 504 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 SLC3A1Q07837 685 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 OR1Q1Q15612 314 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 ZNF141Q15928 474 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 LCN1P1Q5VSP4 162 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 FIGNL1Q6PIW4 674 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 CXXC5Q7LFL8 322 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 ABI3BPQ7Z7G0 1075 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 TPRA1Q86W33 373 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 ZNF527Q8NB42 609 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 TMEM52Q8NDY8 209 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 HAVCR2Q8TDQ0 301 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 SPRYD4Q8WW59 207 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 SAMD8Q96LT4 415 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 ZNF285Q96NJ3 590 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 CCDC3Q9BQI4 270 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 ZNF559Q9BR84 538 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 LRFN3Q9BTN0 628 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 IFT27Q9BW83 186 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 GTPBP2Q9BX10 602 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 RBCK1Q9BYM8 510 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 ADGRL4Q9HBW9 690 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 MEPEQ9NQ76 525 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 ZNF275Q9NSD4 429 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 TEKT2Q9UIF3 430 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 KLHL21Q9UJP4 597 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 GMEB2Q9UKD1 530 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 CLDN16Q9Y5I7 305 aa6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 SIRT4Q9Y6E7 314 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-244ENST00000627109 OR6C70A6NIJ9 312 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 GTPBP1O00178 669 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 TXNL1O43396 289 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 CHP2O43745 196 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 SLC2A10O95528 541 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 SEMA4FO95754 770 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 GPR75O95800 540 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 POLR2CP19387 275 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 ZNF10P21506 573 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 APEX1P27695 318 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 ACAA2P42765 397 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 IKZF1Q13422 519 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 ODF1Q14990 250 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 TRMT12Q53H54 448 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 ZNF542PQ5EBM4 170 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 SLC6A19Q695T7 634 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 HBMQ6B0K9 141 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 PLBD1Q6P4A8 553 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 ZC3H14Q6PJT7 736 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 CPOQ8IVL8 374 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 Q8N402 240 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 ZBTB34Q8NCN2 500 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 OR51A7Q8NH64 312 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 TMEM239Q8WW34 195 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 TSACCQ96A04 125 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 ZFYVE21Q9BQ24 234 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 MED20Q9H944 212 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 CYSLTR2Q9NS75 346 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 C20orf141Q9NUB4 165 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 RBFOX1Q9NWB1 397 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 BABAM2Q9NXR7 383 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 SOCS6O14544 535 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 FGF17O60258 216 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 HPGDSO60760 199 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 CBX7O95931 251 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 PRKAR1AP10644 381 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 IFI30P13284 250 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 PRG2P13727 222 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 HK1P19367 917 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 MYL9P24844 172 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 ZNF85Q03923 595 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 INSL4Q14641 139 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 ALG11Q2TAA5 492 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 MRPL2Q5T653 305 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 DMKNQ6E0U4 476 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 FIGLAQ6QHK4 219 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 COX18Q8N8Q8 333 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms