RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 COL6A5A8TX70 2615 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 TMED7-TICAM2A0A0A6YYA0 188 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 ABCD4O14678 606 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 AGR2O95994 175 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 PGRP06401 933 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 GGT1P19440 569 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 CHI3L1P36222 383 aaPredicted RBP11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 ACAA2P42765 397 aaKnown RBP11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 CLNS1AP54105 237 aaKnown RBP11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 CSNK2A1P68400 391 aaPredicted RBP11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 GABRA6Q16445 453 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 DPY19L1Q2PZI1 675 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 MRPL2Q5T653 305 aaKnown RBP11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 ATAD3BQ5T9A4 648 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 LRRC74BQ6ZQY2 392 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 ZNF100Q8IYN0 542 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 ARFGAP2Q8N6H7 521 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 ANKRD42Q8N9B4 389 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 ZIC4Q8N9L1 334 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 WDR31Q8NA23 367 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 OR52N5Q8NH56 324 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 VPS33AQ96AX1 596 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 MAELQ96JY0 434 aaKnown RBP11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 MUS81Q96NY9 551 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 TRNT1Q96Q11 434 aaKnown RBP11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 ADAM19Q9H013 955 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 KCNK9Q9NPC2 374 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 SLC7A10Q9NS82 523 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 MALT1Q9UDY8 824 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 B3GALT5Q9Y2C3 310 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 NOSIPQ9Y314 301 aaKnown RBP11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 TMED7Q9Y3B3 224 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 HDGFL3Q9Y3E1 203 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 FLVCR1Q9Y5Y0 555 aa11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 CHD3Q12873 2000 aaKnown RBP11.89□□□□□ -0.51
SOX2-OT-241ENST00000626948 A0A1W2PP18 115 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 GKN3PP0CG01 181 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 PRG2P13727 222 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 TACR3P29371 465 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 P2RY4P51582 365 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 IRX1P78414 480 aaPredicted RBP11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 EPS8Q12929 822 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 VEZF1Q14119 521 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 SLC17A1Q14916 467 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 SLC9B1Q4ZJI4 515 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 TSPO2Q5TGU0 170 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 ZNF621Q6ZSS3 439 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 VRK2Q86Y07 508 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 HTRA1Q92743 480 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 AURKBQ96GD4 344 aaPredicted RBP11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 OR52E6Q96RD3 313 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 PANX1Q96RD7 426 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 USB1Q9BQ65 265 aaKnown RBP11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 C1QTNF6Q9BXI9 259 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 REG4Q9BYZ8 158 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 AMBRA1Q9C0C7 1298 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 GRIP2Q9C0E4 1043 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 CENPHQ9H3R5 247 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 NGBQ9NPG2 151 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 TMEM181Q9P2C4 612 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 TRAPPC4Q9Y296 219 aa11.88□□□□□ -0.51
SOX2-OT-241ENST00000626948 MXRA5Q9NR99 2828 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 TMEM120BA0PK00 339 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 FAAHO00519 579 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 DNPH1O43598 174 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 GPRIN2O60269 458 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 CRLF1O75462 422 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 SNUPNO95149 360 aaKnown RBP11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 KITP10721 976 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 ETFAP13804 333 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 HOXB9P17482 250 aaPredicted RBP11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 CLK1P49759 484 aaKnown RBP11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 ZNF83P51522 516 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 CDH11P55287 796 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 OR2B6P58173 313 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 BNIP2Q12982 314 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 RPS26P11Q5JNZ5 115 aaPredicted RBP11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 C9orf135Q5VTT2 229 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 ZNF836Q6ZNA1 936 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 CLIP4Q8N3C7 705 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 VPS37AQ8NEZ2 397 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 OR9I1Q8NGQ6 314 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 PIGXQ8TBF5 258 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 WDR60Q8WVS4 1066 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 APH1AQ96BI3 265 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 ZNF385AQ96PM9 386 aaKnown RBP11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 OR52B2Q96RD2 323 aa11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 PAIP2Q9BPZ3 127 aaKnown RBP11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 MTHFD2LQ9H903 347 aaPredicted RBP11.87□□□□□ -0.51
SOX2-OT-241ENST00000626948 HEATR1Q9H583 2144 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 RTTNQ86VV8 2226 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 IGHV4-30-2A0A087WSY4 118 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 CDHR4A6H8M9 788 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 HDAC3O15379 428 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 ZNF208O43345 1280 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 ZNF500O60304 480 aaPredicted RBP11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 TFPTP0C1Z6 253 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 CD40P25942 277 aa11.86□□□□□ -0.51
SOX2-OT-241ENST00000626948 IDUAP35475 653 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms