RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 CSNK1A1LQ8N752 337 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 BAHD1Q8TBE0 780 aaPredicted RBP10.36□□□□□ -0.75
VARS2-213ENST00000625423 ZNRF4Q8WWF5 429 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 SMIM19Q96E16 107 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 OR14A2Q96R54 314 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.36□□□□□ -0.75
VARS2-213ENST00000625423 ADAM18Q9Y3Q7 739 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 NUBP2Q9Y5Y2 271 aa10.36□□□□□ -0.75
VARS2-213ENST00000625423 TRAV1-2A0A0B4J238 106 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 MCIDASD6RGH6 385 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 IMPA2O14732 288 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 OGG1O15527 345 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 RDH16O75452 317 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 SERPINA3P01011 423 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 MMP15P51511 669 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 GBX2P52951 348 aaPredicted RBP10.35□□□□□ -0.75
VARS2-213ENST00000625423 SRP54P61011 504 aaKnown RBP10.35□□□□□ -0.75
VARS2-213ENST00000625423 PPP1CAP62136 330 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 CAMK2BQ13554 666 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 ALG11Q2TAA5 492 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 ZNF767PQ75MW2 155 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 ZNF655Q8N720 491 aaPredicted RBP10.35□□□□□ -0.75
VARS2-213ENST00000625423 SNX33Q8WV41 574 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 PDCD1LG2Q9BQ51 273 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 CACNG6Q9BXT2 260 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 TWSG1Q9GZX9 223 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 SLCO1C1Q9NYB5 712 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 STMN3Q9NZ72 180 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 CHRNA9Q9UGM1 479 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 TEKT2Q9UIF3 430 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 SERTAD3Q9UJW9 196 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 GNG8Q9UK08 70 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 ARID1BQ8NFD5 2236 aaPredicted RBP10.35□□□□□ -0.75
VARS2-213ENST00000625423 APBB3O95704 486 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 CTSBP07858 339 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 CXCL3P19876 107 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 PSMB10P40306 273 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 RPS11P62280 158 aaKnown RBP eCLIP10.35□□□□□ -0.75
VARS2-213ENST00000625423 SIRPAP78324 504 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 HACD4Q5VWC8 232 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 ZNF761Q86XN6 746 aaPredicted RBP10.35□□□□□ -0.75
VARS2-213ENST00000625423 SLC35F2Q8IXU6 374 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 ZNF431Q8TF32 576 aaPredicted RBP10.35□□□□□ -0.75
VARS2-213ENST00000625423 PMM1Q92871 262 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 ORAI1Q96D31 301 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 CNN2Q99439 309 aaKnown RBP10.35□□□□□ -0.75
VARS2-213ENST00000625423 TRIM2Q9C040 744 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 OR51J1Q9H342 316 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 POLE3Q9NRF9 147 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 HRASLS2Q9NWW9 162 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 MGAT4AQ9UM21 535 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 ING4Q9UNL4 249 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 DOCK8Q8NF50 2099 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 TRBV2A0A0J9YWF9 115 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 C2orf74A8MZ97 194 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 ARL6IP5O75915 188 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 NDUFB2O95178 105 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 MT-ND4P03905 459 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 ANKRD34CP0C6C1 535 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 OR2T7P0C7T2 308 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 EDNRAP25101 427 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 RBM34P42696 430 aaKnown RBP10.35□□□□□ -0.75
VARS2-213ENST00000625423 CAPZA2P47755 286 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 DEFB110Q30KQ9 67 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 NDUFAF6Q330K2 333 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 GXYLT1Q4G148 440 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 KIRREL2Q6UWL6 708 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 UBE2Q1Q7Z7E8 422 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 OR2T27Q8NH04 317 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 HAVCR2Q8TDQ0 301 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 C17orf50Q8WW18 174 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 ELSPBP1Q96BH3 223 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 ZFP64Q9NPA5 681 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 ABRACLQ9P1F3 81 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 PRUNE2Q8WUY3 3088 aa10.35□□□□□ -0.75
VARS2-213ENST00000625423 HRKO00198 91 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 LINC01565O15544 149 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 PITPNAQ00169 270 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 GRAMD2AQ8IUY3 354 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 BEST4Q8NFU0 473 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 OR8H1Q8NGG4 311 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 OR9A4Q8NGU2 314 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 OR51Q1Q8NH59 317 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 ZNF671Q8TAW3 534 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 ASB12Q8WXK4 309 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 RSC1A1Q92681 617 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 MS4A3Q96HJ5 214 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 NMNAT3Q96T66 252 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 CCDC3Q9BQI4 270 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 NKX2-4Q9H2Z4 354 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 WSB2Q9NYS7 404 aaPredicted RBP10.34□□□□□ -0.75
VARS2-213ENST00000625423 ICAM5Q9UMF0 924 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 COPS3Q9UNS2 423 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 DTX4Q9Y2E6 619 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 ENTPD2Q9Y5L3 495 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 EGFP01133 1207 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 UCHL1P09936 223 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 SLC35E2P0CK97 266 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 S1PR1P21453 382 aa10.34□□□□□ -0.75
VARS2-213ENST00000625423 RPL4P36578 427 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms