RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 SIGLEC12Q96PQ1 595 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 VPS35Q96QK1 796 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 ACCSQ96QU6 501 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 CCNL2Q96S94 520 aaPredicted RBP3.04□□□□□ -1.92
BRCA1-229ENST00000621897 CCT8L2Q96SF2 557 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 API5Q9BZZ5 524 aaKnown RBP3.04□□□□□ -1.92
BRCA1-229ENST00000621897 WWP1Q9H0M0 922 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 POLR3FQ9H1D9 316 aaPredicted RBP3.04□□□□□ -1.92
BRCA1-229ENST00000621897 GAL3ST2Q9H3Q3 398 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 CSNK1G1Q9HCP0 422 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 PIPOXQ9P0Z9 390 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 RNF24Q9Y225 148 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 ESYT2A0FGR8 921 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 METTL21EPA6NDL7 271 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 TRPC5OSA6NMA1 111 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 NPIPA2E9PIF3 369 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 CHEK1O14757 476 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 TRAPPC3O43617 180 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 STX11O75558 287 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 TM7SF2O76062 418 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 TSPAN12O95859 305 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 PGK1P00558 417 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 PRB2P02812 416 aaPredicted RBP3.03□□□□□ -1.92
BRCA1-229ENST00000621897 RETP07949 1114 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 ANXA4P09525 319 aaPredicted RBP3.03□□□□□ -1.92
BRCA1-229ENST00000621897 CCNOP22674 350 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 UQCRC2P22695 453 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 GLRA1P23415 457 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 HOXA9P31269 272 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 MAGEA9P43362 315 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 CCT3P49368 545 aaKnown RBP3.03□□□□□ -1.92
BRCA1-229ENST00000621897 NLRP11P59045 1033 aaKnown RBP3.03□□□□□ -1.92
BRCA1-229ENST00000621897 SKP1P63208 163 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 ENPEPQ07075 957 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 TGFBIQ15582 683 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 STX1AQ16623 288 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 C14orf28Q4W4Y0 310 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 AGKQ53H12 422 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 C2orf83Q53S99 150 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 C6orf226Q5I0X4 101 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 THEM4Q5T1C6 240 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 CAPN13Q6MZZ7 669 aaPredicted RBP3.03□□□□□ -1.92
BRCA1-229ENST00000621897 CCDC137Q6PK04 289 aaKnown RBP3.03□□□□□ -1.92
BRCA1-229ENST00000621897 SASS6Q6UVJ0 657 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 CENPUQ71F23 418 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 SLC22A16Q86VW1 577 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 STX12Q86Y82 276 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 GPR65Q8IYL9 337 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 PRR22Q8IZ63 422 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 ZNF525Q8N782 197 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 SYT14Q8NB59 555 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 ICA1LQ8NDH6 482 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 FAM83FQ8NEG4 500 aaPredicted RBP3.03□□□□□ -1.92
BRCA1-229ENST00000621897 BEST4Q8NFU0 473 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 OR1K1Q8NGR3 316 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 PHOSPHO2Q8TCD6 241 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 SLC38A4Q969I6 547 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 MRPL24Q96A35 216 aaKnown RBP3.03□□□□□ -1.92
BRCA1-229ENST00000621897 PCED1BQ96HM7 432 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 TESK2Q96S53 571 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 WRAP53Q9BUR4 548 aaKnown RBP3.03□□□□□ -1.92
BRCA1-229ENST00000621897 ANGPTL4Q9BY76 406 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 MFFQ9GZY8 342 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 ANKRA2Q9H9E1 313 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 ELOVL3Q9HB03 270 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 AMBNQ9NP70 447 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 DMAP1Q9NPF5 467 aaPredicted RBP3.03□□□□□ -1.92
BRCA1-229ENST00000621897 C20orf96Q9NUD7 363 aaPredicted RBP3.03□□□□□ -1.92
BRCA1-229ENST00000621897 VNN3Q9NY84 501 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 RBAKQ9NYW8 714 aaPredicted RBP3.03□□□□□ -1.92
BRCA1-229ENST00000621897 IL37Q9NZH6 218 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 ADAM22Q9P0K1 906 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 NARFQ9UHQ1 456 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 CYTH4Q9UIA0 394 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 ZNF639Q9UID6 485 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 RASD1Q9Y272 281 aa3.03□□□□□ -1.92
BRCA1-229ENST00000621897 PUS1Q9Y606 427 aaKnown RBP eCLIP3.03□□□□□ -1.92
BRCA1-229ENST00000621897 POLR3AO14802 1390 aaPredicted RBP3.02□□□□□ -1.93
BRCA1-229ENST00000621897 ZMYM6O95789 1325 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 GOLGA8QA0A0J9YX86 632 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 TRBV11-1A0A0K0K1C0 115 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 ATP6AP2A0A1C7CYW4 349 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 RNF222A6NCQ9 220 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 E9PMD0 336 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 SGK494L7N484 410 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 CLDN5O00501 218 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 OR1F1O43749 312 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 TIMM8AO60220 97 aaPredicted RBP3.02□□□□□ -1.93
BRCA1-229ENST00000621897 JAK2O60674 1132 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 SCN2BO60939 215 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 GMNNO75496 209 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 ZNF189O75820 626 aaPredicted RBP3.02□□□□□ -1.93
BRCA1-229ENST00000621897 SCGNO76038 276 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 PDE5AO76074 875 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 OR2F2O95006 317 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 LCA5LO95447 670 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 SYNGR4O95473 234 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 GOT2P00505 430 aaKnown RBP3.02□□□□□ -1.93
BRCA1-229ENST00000621897 CHRNGP07510 517 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 APRTP07741 180 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms