RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 A0A1B0GV50 99 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 FOXE1O00358 373 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 PRAMEF2O60811 474 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 CSO75390 466 aaKnown RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 OR7A10O76100 309 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 EFEMP2O95967 443 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 MT-ND5P03915 603 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 MMP12P39900 470 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 ETV5P41161 510 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 ZNF91Q05481 1191 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 ZFP69Q49AA0 526 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 AGAP6Q5VW22 663 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 VASH2Q86V25 355 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 NEIL3Q8TAT5 605 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 AGAP4Q96P64 663 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 ACTRT3Q9BYD9 372 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 ZNF442Q9H7R0 627 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 HHATLQ9HCP6 504 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 NUFIP1Q9UHK0 495 aaKnown RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 DUSP13Q9UII6 198 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 AP1M2Q9Y6Q5 423 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 TRPM6Q9BX84 2022 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 ARHGEF17Q96PE2 2063 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 A0A0X1KG70 313 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 METTL21EPA6NDL7 271 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 UNC119BA6NIH7 251 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 PDCD5O14737 125 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 ADAP00813 363 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 HLA-DPB1P04440 258 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 NOVA1P51513 510 aaKnown RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 ADPRHP54922 357 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 GNG2P59768 71 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 POU3F1Q03052 451 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 FOXC1Q12948 553 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 TMEM196Q5HYL7 178 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 NXNL2Q5VZ03 156 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 KCTD18Q6PI47 426 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 TECPR1Q7Z6L1 1165 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 SERPINA12Q8IW75 414 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 ZNF619Q8N2I2 560 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 LRRC18Q8N456 261 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 IL17RCQ8NAC3 791 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 GOT1L1Q8NHS2 421 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 THAP4Q8WY91 577 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 ELF4Q99607 663 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 MND1Q9BWT6 205 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 HOXD1Q9GZZ0 328 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 MMP28Q9H239 520 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 FANCFQ9NPI8 374 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 YBX2Q9Y2T7 364 aaKnown RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 MYO7BQ6PIF6 2116 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 ABCA2Q9BZC7 2435 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 PLXNB3Q9ULL4 1909 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 PLPP1O14494 284 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 TNFSF12O43508 249 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 ARL6IP5O75915 188 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 ELAVL4P26378 380 aaKnown RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 OCLNQ16625 522 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 TP53I3Q53FA7 332 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 DMRTC1Q5HYR2 192 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 DCAF12Q5T6F0 453 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 TCTN3Q6NUS6 607 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 DHRS13Q6UX07 377 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 ZNF565Q8N9K5 539 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 ZNF578Q96N58 590 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 NECAB3Q96P71 396 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 TTYH1Q9H313 450 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 MTHFD2LQ9H903 347 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 THAP10Q9P2Z0 257 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 BOLA1Q9Y3E2 137 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 ENTPD2Q9Y5L3 495 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 SCN3AQ9NY46 2000 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 PPM1DO15297 605 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 ZNF749O43361 778 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 AIFM1O95831 613 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 DBHP09172 617 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 VASPP50552 380 aaPredicted RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 AKR1D1P51857 326 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 GFERP55789 205 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 PCBP3P57721 371 aaKnown RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 RPA4Q13156 261 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 DOC2BQ14184 412 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 IRF3Q14653 427 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 DUSP6Q16828 381 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 CCDC190Q86UF4 302 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 GRAMD2AQ8IUY3 354 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 SFTPA1Q8IWL2 248 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 LAS2Q8IYD9 372 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 SLC41A3Q96GZ6 507 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 DUSP23Q9BVJ7 150 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 SEC14L4Q9UDX3 406 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 MGAT4BQ9UQ53 548 aa7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 NOP16Q9Y3C1 178 aaKnown RBP7.68□□□□□ -1.18
PTPDC1-204ENST00000620992 FXYD6-FXYD2A0A087WZ82 144 aa7.67□□□□□ -1.18
PTPDC1-204ENST00000620992 A0A1W2PQ09 198 aa7.67□□□□□ -1.18
PTPDC1-204ENST00000620992 SLC16A7O60669 478 aa7.67□□□□□ -1.18
PTPDC1-204ENST00000620992 SCG5P05408 212 aa7.67□□□□□ -1.18
PTPDC1-204ENST00000620992 CLEC2LP0C7M8 214 aa7.67□□□□□ -1.18
PTPDC1-204ENST00000620992 DDCP20711 480 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms