RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 CFLARO15519 480 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 HNRNPRO43390 633 aaKnown RBP6.69□□□□□ -1.34
CBWD1-228ENST00000619157 HCRTR2O43614 444 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 HOXD4P09016 255 aaPredicted RBP6.69□□□□□ -1.34
CBWD1-228ENST00000619157 OR12D1P0DN82 309 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 HOXB9P17482 250 aaPredicted RBP6.69□□□□□ -1.34
CBWD1-228ENST00000619157 MATN1P21941 496 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 CHMP24386 653 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 SHC1P29353 583 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 AGFG1P52594 562 aaKnown RBP6.69□□□□□ -1.34
CBWD1-228ENST00000619157 MVDP53602 400 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 ZNF117Q03924 483 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 SRYQ05066 204 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 SNTB1Q13884 538 aaKnown RBP6.69□□□□□ -1.34
CBWD1-228ENST00000619157 TOMM34Q15785 309 aaPredicted RBP6.69□□□□□ -1.34
CBWD1-228ENST00000619157 CTU2Q2VPK5 515 aaKnown RBP6.69□□□□□ -1.34
CBWD1-228ENST00000619157 SPDYE7PQ495Y7 208 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 GTDC1Q4AE62 458 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 KLHL26Q53HC5 615 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 SPATA19Q7Z5L4 167 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 HMGN2P46Q86SG4 172 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 LACC1Q8IV20 430 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 FUNDC1Q8IVP5 155 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 EID3Q8N140 333 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 NATD1Q8N6N6 113 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 CHDHQ8NE62 594 aaPredicted RBP6.69□□□□□ -1.34
CBWD1-228ENST00000619157 OR4K17Q8NGC6 315 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 OR4A15Q8NGL6 344 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 OR10Q1Q8NGQ4 319 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 ZPLD1Q8TCW7 415 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 MIPOL1Q8TD10 442 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 ADAMTS15Q8TE58 950 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 SCARB1Q8WTV0 552 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 ASB5Q8WWX0 329 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 FIG4Q92562 907 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 RAB8BQ92930 207 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 NEURL3Q96EH8 262 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 SH3YL1Q96HL8 342 aaPredicted RBP6.69□□□□□ -1.34
CBWD1-228ENST00000619157 ZNF845Q96IR2 970 aaPredicted RBP6.69□□□□□ -1.34
CBWD1-228ENST00000619157 SFXN2Q96NB2 322 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 TRIB1Q96RU8 372 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 PRPF18Q99633 342 aaKnown RBP6.69□□□□□ -1.34
CBWD1-228ENST00000619157 TBL1XR1Q9BZK7 514 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 OR51I1Q9H343 314 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 SLC52A3Q9NQ40 469 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 SDR39U1Q9NRG7 319 aaPredicted RBP6.69□□□□□ -1.34
CBWD1-228ENST00000619157 COQ3Q9NZJ6 369 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 DKKL1Q9UK85 242 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 ICAM5Q9UMF0 924 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 VDAC3Q9Y277 283 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 HCFC1P51610 2035 aa6.69□□□□□ -1.34
CBWD1-228ENST00000619157 CELSR1Q9NYQ6 3014 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 ARHGAP21Q5T5U3 1957 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 CCDC168Q8NDH2 2452 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 CLDN24A6NM45 220 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 TRPC5OSA6NMA1 111 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 HMGN4O00479 90 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 DIAPH2O60879 1101 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 UGT2B17O75795 530 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 TNFSF13O75888 250 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 DNAJC8O75937 253 aaPredicted RBP6.68□□□□□ -1.34
CBWD1-228ENST00000619157 LINGO3P0C6S8 592 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 UQCRC2P22695 453 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 LCN1P31025 176 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 S100A3P33764 101 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 PTGER4P35408 488 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 TIMP3P35625 211 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 ATP12AP54707 1039 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 PSMD4P55036 377 aaKnown RBP6.68□□□□□ -1.34
CBWD1-228ENST00000619157 BLOC1S1P78537 153 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 C17orf67Q0P5P2 114 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 PLPPR5Q32ZL2 321 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 ARHGAP11BQ3KRB8 267 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 LCE1AQ5T7P2 110 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 RAET1LQ5VY80 246 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 AP1ARQ63HQ0 302 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 NXNQ6DKJ4 435 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 TYW3Q6IPR3 259 aaKnown RBP6.68□□□□□ -1.34
CBWD1-228ENST00000619157 TNFAIP8L2Q6P589 184 aaPredicted RBP6.68□□□□□ -1.34
CBWD1-228ENST00000619157 MEX3BQ6ZN04 569 aaKnown RBP6.68□□□□□ -1.34
CBWD1-228ENST00000619157 FRRS1Q6ZNA5 592 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 PM20D2Q8IYS1 436 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 UBQLNLQ8IYU4 475 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 KIRREL3Q8IZU9 778 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 C10orf111Q8N326 155 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 CKAP2Q8WWK9 683 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 VPS33AQ96AX1 596 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 MOAP1Q96BY2 351 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 AURKBQ96GD4 344 aaPredicted RBP6.68□□□□□ -1.34
CBWD1-228ENST00000619157 ADGRG7Q96K78 797 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 SLC35G5Q96KT7 338 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 RSPO3Q9BXY4 272 aaPredicted RBP6.68□□□□□ -1.34
CBWD1-228ENST00000619157 ZNF350Q9GZX5 532 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 CALHM2Q9HA72 323 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 CHST11Q9NPF2 352 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 UBQLN4Q9NRR5 601 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 MED17Q9NVC6 651 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 JKAMPQ9P055 326 aa6.68□□□□□ -1.34
CBWD1-228ENST00000619157 BTNL2Q9UIR0 455 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms