RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 A6NIZ1 184 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 GYPBP06028 91 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 RAP1BP61224 184 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 RAP1AP62834 184 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 EIF2S3LQ2VIR3 472 aaKnown RBP12.85□□□□□ -0.35
CIITA-213ENST00000618327 ABCA11PQ4W5N1 156 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 TIGD4Q8IY51 512 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 TSLPQ969D9 159 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 OR2A5Q96R48 311 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 SNAPC5O75971 98 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 OPN1LWP04000 364 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 CHRM4P08173 479 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 ANXA3P12429 323 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 IDUAP35475 653 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 WNT3P56703 355 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 ZNF91Q05481 1191 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 PRKCDQ05655 676 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 C17orf67Q0P5P2 114 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 DHRS4L2Q6PKH6 230 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 GPR137CQ8N3F9 429 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 CCDC54Q8NEL0 328 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 GOT1L1Q8NHS2 421 aaPredicted RBP12.85□□□□□ -0.35
CIITA-213ENST00000618327 SLC7A13Q8TCU3 470 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 MAFIPQ8WZ33 124 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 ZNF471Q9BX82 626 aaPredicted RBP12.85□□□□□ -0.35
CIITA-213ENST00000618327 ACER3Q9NUN7 267 aa12.85□□□□□ -0.35
CIITA-213ENST00000618327 THBS1P07996 1170 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 DNASE1P24855 282 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 PIGAP37287 484 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 PLP2Q04941 152 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 CHAF1BQ13112 559 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 SLC14A1Q13336 389 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 ATXN7L3Q14CW9 347 aaPredicted RBP12.84□□□□□ -0.35
CIITA-213ENST00000618327 ZNF181Q2M3W8 571 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 PRAMEF20Q5VT98 475 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 SLC35F2Q8IXU6 374 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 DNAJC5GQ8N7S2 189 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 S100PBPQ96BU1 408 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 SCGB3A2Q96PL1 93 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 SLC6A5Q9Y345 797 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 P2RX6O15547 441 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 SPINT1O43278 529 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 RGS9O75916 674 aaPredicted RBP12.84□□□□□ -0.35
CIITA-213ENST00000618327 EFEMP2O95967 443 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 HCKP08631 526 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 MAP2K3P46734 347 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 SSR4P51571 173 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 AGERQ15109 404 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 LRRC69Q6ZNQ3 347 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 AMER3Q8N944 861 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 SYT14Q8NB59 555 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 C14orf119Q9NWQ9 140 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 C2orf42Q9NWW7 574 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 TAS2R3Q9NYW6 316 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 SCN5AQ14524 2016 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 IL7P13232 177 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 HOXB3P14651 431 aaPredicted RBP12.84□□□□□ -0.35
CIITA-213ENST00000618327 VAMP2P63027 116 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 ARG2P78540 354 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 GPR139Q6DWJ6 353 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 C1orf210Q8IVY1 113 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 KLHL15Q96M94 604 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 TNFRSF13CQ96RJ3 184 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 BCL7BQ9BQE9 202 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 FANCFQ9NPI8 374 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 RP1L1Q8IWN7 2480 aaPredicted RBP12.84□□□□□ -0.35
CIITA-213ENST00000618327 SPAG17Q6Q759 2223 aa12.84□□□□□ -0.35
CIITA-213ENST00000618327 C13orf42A0A1B0GVH6 325 aa12.83□□□□□ -0.35
CIITA-213ENST00000618327 KCNK2O95069 426 aa12.83□□□□□ -0.35
CIITA-213ENST00000618327 APOC3P02656 99 aa12.83□□□□□ -0.35
CIITA-213ENST00000618327 C3orf38Q5JPI3 329 aa12.83□□□□□ -0.35
CIITA-213ENST00000618327 MEPCEQ7L2J0 689 aaKnown RBP12.83□□□□□ -0.35
CIITA-213ENST00000618327 ZNF100Q8IYN0 542 aa12.83□□□□□ -0.35
CIITA-213ENST00000618327 ALDH16A1Q8IZ83 802 aa12.83□□□□□ -0.35
CIITA-213ENST00000618327 S100A16Q96FQ6 103 aaKnown RBP12.83□□□□□ -0.35
CIITA-213ENST00000618327 CCDC74BQ96LY2 380 aa12.83□□□□□ -0.35
CIITA-213ENST00000618327 PITX2Q99697 317 aa12.83□□□□□ -0.35
CIITA-213ENST00000618327 ACOT13Q9NPJ3 140 aa12.83□□□□□ -0.35
CIITA-213ENST00000618327 DHDHQ9UQ10 334 aa12.83□□□□□ -0.35
CIITA-213ENST00000618327 CROCCQ5TZA2 2017 aa12.83□□□□□ -0.35
CIITA-213ENST00000618327 ANK1P16157 1881 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 F13BP05160 661 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 FPR3P25089 353 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 POLR2HP52434 150 aaKnown RBP12.83□□□□□ -0.36
CIITA-213ENST00000618327 CTBP2P56545 445 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 PSPHP78330 225 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 GALK2Q01415 458 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 CALHM3Q86XJ0 350 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 MSRB3Q8IXL7 192 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 DNAJC22Q8N4W6 341 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 C16orf52Q8NHV5 167 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 GPN2Q9H9Y4 310 aaPredicted RBP12.83□□□□□ -0.36
CIITA-213ENST00000618327 SEMA4GQ9NTN9 838 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 EXTL2Q9UBQ6 330 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 UBQLN2Q9UHD9 624 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 SUSD5O60279 629 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 TBX19O60806 448 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 CCL7P80098 99 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 GLO1Q04760 184 aa12.83□□□□□ -0.36
CIITA-213ENST00000618327 MLC1Q15049 377 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms