RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 TBC1D3KA0A087X1G2 549 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 TBC1D3BA6NDS4 549 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 TBC1D3FA6NER0 549 aaPredicted RBP13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 TBC1D3LB9A6J9 549 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 HLA-AP01891 365 aaKnown RBP13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 ACAA1P09110 424 aaPredicted RBP13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 TBC1D3HP0C7X1 549 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 HOXB3P14651 431 aaPredicted RBP13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 CR2P20023 1033 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 NME2P22392 152 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 AK4P27144 223 aaPredicted RBP13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 OPRD1P41143 372 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 H2BFSP57053 126 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 FBXW4P57775 412 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 SREBF2Q12772 1141 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 ENTPD8Q5MY95 495 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 TBC1D3GQ6DHY5 549 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 OR7E24Q6IFN5 339 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 TBC1D3CQ6IPX1 549 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 ZNF770Q6IQ21 691 aaPredicted RBP13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 TBC1D3Q8IZP1 549 aaPredicted RBP13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 CHCHD4Q8N4Q1 142 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 OR13C2Q8NGS9 318 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 SMIM4Q8WVI0 70 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 MEGF10Q96KG7 1140 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 PRRC1Q96M27 445 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 EFCAB11Q9BUY7 163 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 TLNRD1Q9H1K6 362 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 SUV39H2Q9H5I1 410 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 OPN4Q9UHM6 478 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 SLC38A8A6NNN8 435 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 CACNB4O00305 520 aaPredicted RBP13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 S100PP25815 95 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 TEAD1P28347 426 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 IRS1P35568 1242 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 CTSOP43234 321 aaPredicted RBP13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 ST8SIA6P61647 398 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 ZNF616Q08AN1 781 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 GDF6Q6KF10 455 aaPredicted RBP13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 ETV3LQ6ZN32 361 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 C2orf69Q8N8R5 385 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 OR5P2Q8WZ92 322 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 PDXPQ96GD0 296 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 GPR62Q9BZJ7 368 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 SMIM3Q9BZL3 60 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 NEUROD4Q9HD90 331 aa13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 ADARB2Q9NS39 739 aaKnown RBP13□□□□□ -0.33
TNFRSF11A-205ENST00000616710 A0A1B0GV90 55 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 IDSB3KWA1 339 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 STC2O76061 302 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 F2P00734 622 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 F3P13726 295 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 PCSK2P16519 638 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 G0S2P27469 103 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 RPS10P46783 165 aaKnown RBP12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 GATMP50440 423 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 PLA2G7Q13093 441 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 SKP2Q13309 424 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 B3GNTL1Q67FW5 361 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 ETFBKMTQ8IXQ9 262 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 CMTM8Q8IZV2 173 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 EIF5A2Q9GZV4 153 aaKnown RBP12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 TSPAN10Q9H1Z9 355 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 GPN3Q9UHW5 284 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 URGCP-MRPS24S4R325 110 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 IGLV3-10A0A075B6K4 115 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 KCNE1BA0A087WTH5 132 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 A0A1B0GUH1 482 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 PSMB5P28074 263 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 RPS27P42677 84 aaKnown RBP12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 MMP15P51511 669 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 ZNF280AP59817 542 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 TSPAN31Q12999 210 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 XKR4Q5GH76 650 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 TMEM201Q5SNT2 666 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 ZNF585AQ6P3V2 769 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 SEMA6DQ8NFY4 1073 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 SLC41A3Q96GZ6 507 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 ENKD1Q9H0I2 346 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 FGF20Q9NP95 211 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 CA5BQ9Y2D0 317 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 SCN2AQ99250 2005 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 ARID2Q68CP9 1835 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 DNAJC25-GNG10A0A024R161 153 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 WRBO00258 174 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 ABCD4O14678 606 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 HTR1FP30939 366 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 RFC3P40938 356 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 GPR1P46091 355 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 LSSP48449 732 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 S100A12P80511 92 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 ALKBH1Q13686 389 aaKnown RBP12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 SMAD2Q15796 467 aaKnown RBP12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 PRAMEF14Q5SWL7 426 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 MEPCEQ7L2J0 689 aaKnown RBP12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 FOXN4Q96NZ1 517 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 ATG4BQ9Y4P1 393 aa12.99□□□□□ -0.33
TNFRSF11A-205ENST00000616710 TMEM218A2RU14 115 aa12.98□□□□□ -0.33
TNFRSF11A-205ENST00000616710 OR5H14A6NHG9 310 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms